Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02528 ATGGGACTGCCGCTGATTTTCCTGCTAATTCAGCTGCATTTAGTTGTCTGCACTCAGCAGATTCATGAATATGCAGCCACCAAACTGCAACATTCCAGTGACAGAAGCCATTTTAGTATTGCAATCCCACCAAAGTCATCTTCTGAAGGTCATTCAAGCATTGCACATTCACCTTCCAAGTCATCTTCTGGGGTACCTGAAAGCATTGCAGTTTCACCTTCCAAGTTAATTCACAAAGCTCCTACAATCATTTGGACACATGGTTCAGATGATTCCCCAATCTCACATCATAAGCATCACTATTCTAAAAGAAAGTTCCACAATCCAACTATAGCACCAATCTATGCAGTCCAGCCTCCTACATACATCCATCAAGGTCCTTCAGTCTTCAAATCACTACCTCCTTTCTCTTCACCAAATATTAAGGATATTCATGCCCCGGCCCCTGCACCATCACCAGCTATTGTACCACCAAGTCACTTCAATGTACCCTCTACTTCACCAATGATTTCTCCTCTAGGTTCATCATTGCAGAAGAAAAAGACTCCACCCCCAGCATATGAATTTGTTCTGCCACCTCCACCTCCCAATAAGGATTGCTTGTCGATGACTTGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAAATACATATCAACATTGCAATATACAAGTTTTTTCCATTGGTTGCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTTTACTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCAGCTAGTCAGCAACTGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACTGCATTTTTAATATATAAGAAATTTTGGCGCAGGGAGATTCTGATAGATGCTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCGTCAACTCCCTCAGATGCTTCTGTAATAGATGATGAGCCAAATCCAGGACATGGCAACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTTCCAAAGAAGAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGATTTGCGCGCTGAAATGCTGTGGCTATGTTCATGAACACAAACCAGTTCCGGATGGTTTAATTTCATCCTCTTCAAAGCAATCAAGAGCTGCTAGGTCATTGGCTCGCGGGATCAGGTCAGGTTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATACACAGGGTCTGCAAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTTAATGATGGGAGGGATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAACGTGGTGGTCGTGAATTTTTGGCAGAAGTTGAGATGCTTAGTCGTCTACACCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTTTGGAATCTCACTTGCATGGAGCTGACAAGGAAACTGATCCATTGGATTGGAATGCGCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGTTTGGCCTATCTGCATGAAGACTCAAATCCATGTGTCATACATCGGGATTTCAAGGCCAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCTATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTTTTAACTGGAAGAAAGCCAGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCTAACATTTCCCTTGATATTGTAGTTAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGCCCTTTCATGGGAGAGGTTGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGGTTGAGGAAACAGACTATTTAAGATCAATGAGTTATCAAGAGGGTTTTCTAACTGATGTGGAAGGAAAGTTTTCGGAAGCTTCAGGTGAAAGAATGGAATTTTCAGAGTATCAAAAAACGCTTTCTGGCTATCAATCTGGTGAAGAAAAGGTAGAATTATCAGCACCAGAGTTTCTCAGTGCTTCAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGATCGGGGCCTCTCACCATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGAGAAGTTTGTCTGGTGGTAGCACCAGTGAACATGGATTTTCAACTAAACTATGGTCTGGATCGCATTAA 2571 0.4236 MGLPLIFLLIQLHLVVCTQQIHEYAATKLQHSSDRSHFSIAIPPKSSSEGHSSIAHSPSKSSSGVPESIAVSPSKLIHKAPTIIWTHGSDDSPISHHKHHYSKRKFHNPTIAPIYAVQPPTYIHQGPSVFKSLPPFSSPNIKDIHAPAPAPSPAIVPPSHFNVPSTSPMISPLGSSLQKKKTPPPAYEFVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKIHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWRREILIDASVFGAYEVLYVHYPGLPPSPPSTPSDASVIDDEPNPGHGNNGMMMKPLGVDVPKKKKEGSNGRMIVIIVLSSVTAFVVFIGLAWICALKCCGYVHEHKPVPDGLISSSSKQSRAARSLARGIRSGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSLESHLHGADKETDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPNISLDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEETDYLRSMSYQEGFLTDVEGKFSEASGERMEFSEYQKTLSGYQSGEEKVELSAPEFLSASGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSGGSTSEHGFSTKLWSGSH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02528 856 FunFam receptor-like serine/threonine-protein kinase ALE2 438 540 - -
Viun10g02528 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 541 756 - -
Viun10g02528 856 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Viun10g02528 856 PANTHER OS01G0750732 PROTEIN 192 756 - -
Viun10g02528 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Viun10g02528 856 Gene3D Phosphorylase Kinase; domain 1 437 540 - -
Viun10g02528 856 SUPERFAMILY Protein kinase-like (PK-like) 444 738 IPR011009 -
Viun10g02528 856 MobiDBLite consensus disorder prediction 329 351 - -
Viun10g02528 856 Gene3D Transferase(Phosphotransferase) domain 1 541 759 - -
Viun10g02528 856 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Viun10g02528 856 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02528 856 CDD STKc_IRAK 471 739 - -
Viun10g02528 856 MobiDBLite consensus disorder prediction 38 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02528 Viun-Chr10 39184633 39190101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02528 197 856 Receptor kinase-like Gene Family AT5G56890 60.089 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun10g02528 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02528 - - gmx:100814040 1471.06