Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02527 ATGGGACTGCCGCTGATTTTCCTGCTAATTCAGCTGCATTTAGTTGTCTGCACTCAGCAGATTCATGAATATGCAGCCACCAAACTGCAACATTCCAGTGACAGAAGCCATTTTAGTATTGCAATCCCACCAAAGTCATCTTCTGAAGGTCATTCAAGCATTGCACATTCACCTTCCAAGTCATCTTCTGGGGTACCTGAAAGCATTGCAGTTTCACCTTCCAAGTTAATTCACAAAGCTCCTACAATCATTTGGACACATGGTTCAGATGATTCCCCAATCTCACATCATAAGCATCACTATTCTAAAAGAAAGTTCCACAATCCAACTATAGCACCAATCTATGCAGTCCAGCCTCCTACATACATCCATCAAGGTCCTTCAGTCTTCAAATCACTACCTCCTTTCTCTTCACCAAATATTAAGGATATTCATGCCCCGGCCCCTGCACCATCACCAGCTATTGTACCACCAAGTCACTTCAATGTACCCTCTACTTCACCAATGATTTCTCCTCTAGGTTCATCATTGCAGAAGAAAAAGACTCCACCCCCAGCATATGAATTTGTTCTGCCACCTCCACCTCCCAATAAGGATTGCTTGTCGATGACTTGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAAATACATATCAACATTGCAATATACAAGTTTTTTCCATTGGTTGCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTTTACTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCAGCTAGTCAGCAACTGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACTGCATTTTTAATATATAAGAAATTTTGGCGCAGGGAGATTCTGATAGATGCTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCGTCAACTCCCTCAGATGCTTCTGTAATAGATGATGAGCCAAATCCAGGACATGGCAACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTTCCAAAGAAGAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGATTTGCGCGCTGAAATGCTGTGGCTATGTTCATGAACACAAACCAGTTCCGGATGGTTTAATTTCATCCTCTTCAAAGCAATCAACAGGAGCTGCTAGGTCATTGGCTCGCGGGATCAGGTCAGGTTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATACACAGGGTCTGCAAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTTAATGATGGGAGGGATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAACGTGGTGGTCGTGAATTTTTGGCAGAAGTTGAGATGCTTAGTCGTCTACACCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTTTGGAATCTCACTTGCATGGAGCTGACAAGGAAACTGATCCATTGGATTGGAATGCGCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGTTTGGCCTATCTGCATGAAGACTCAAATCCATGTGTCATACATCGGGATTTCAAGGCCAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCTATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTTTTAACTGGAAGAAAGCCAGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCTAACATTTCCCTTGATATTGTAGTTAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGCCCTTTCATGGGAGAGGTTGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGGTTGAGGAAACAGACTATTTAAGATCAATGAGTTATCAAGAGGGTTTTCTAACTGATGTGGAAGGAAAGTTTTCGGAAGCTTCAGGTGAAAGAATGGAATTTTCAGAGTATCAAAAAACGCTTTCTGGCTATCAATCTGGTGAAGAAAAGGTAGAATTATCAGCACCAGAGTTTCTCAGTGCTTCAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGATCGGGGCCTCTCACCATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGAGAAGTTTGTCTGGTGGTAGCACCAGTGAACATGGATTTTCAACTAAACTATGGTCTGGATCGCATTAA 2574 0.4239 MGLPLIFLLIQLHLVVCTQQIHEYAATKLQHSSDRSHFSIAIPPKSSSEGHSSIAHSPSKSSSGVPESIAVSPSKLIHKAPTIIWTHGSDDSPISHHKHHYSKRKFHNPTIAPIYAVQPPTYIHQGPSVFKSLPPFSSPNIKDIHAPAPAPSPAIVPPSHFNVPSTSPMISPLGSSLQKKKTPPPAYEFVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKIHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWRREILIDASVFGAYEVLYVHYPGLPPSPPSTPSDASVIDDEPNPGHGNNGMMMKPLGVDVPKKKKEGSNGRMIVIIVLSSVTAFVVFIGLAWICALKCCGYVHEHKPVPDGLISSSSKQSTGAARSLARGIRSGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSLESHLHGADKETDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPNISLDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEETDYLRSMSYQEGFLTDVEGKFSEASGERMEFSEYQKTLSGYQSGEEKVELSAPEFLSASGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSGGSTSEHGFSTKLWSGSH 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02527 857 Gene3D Transferase(Phosphotransferase) domain 1 542 760 - -
Viun10g02527 857 ProSiteProfiles Protein kinase domain profile. 466 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02527 857 SUPERFAMILY Protein kinase-like (PK-like) 445 739 IPR011009 -
Viun10g02527 857 CDD STKc_IRAK 472 740 - -
Viun10g02527 857 FunFam Receptor-like serine/threonine-protein kinase ALE2 542 757 - -
Viun10g02527 857 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Viun10g02527 857 PANTHER OS01G0750732 PROTEIN 192 757 - -
Viun10g02527 857 MobiDBLite consensus disorder prediction 329 351 - -
Viun10g02527 857 Gene3D Phosphorylase Kinase; domain 1 438 541 - -
Viun10g02527 857 FunFam receptor-like serine/threonine-protein kinase ALE2 439 541 - -
Viun10g02527 857 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Viun10g02527 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Viun10g02527 857 MobiDBLite consensus disorder prediction 38 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02527 Viun-Chr10 39184632 39190101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02527 197 857 Receptor kinase-like Gene Family AT5G56890 60.148 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun10g02527 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02527 - - gmx:100814040 1469.14