Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02524 ATGAATCGCTCTCTGTTGCTGAAACGGCATAACGATGTGAAGATGATAATCTCCACAACAAGAAATGGCAACAGCACCACTCAGGCTTGCGCTGCATGCAAGTACCAACGCAGAAAATGCGCCCCCGACTGCATTCTCGCGCCCTATTTCCCGCACGACCGACAGCGCCAGTTCCTCAACGCCCACAAACTCTTCGGAGTAAGCAACATCACCAAAATCATCAAGGTTGTCAGCCCCCGCGACAAGGACCAAGCCATGCGAACCATCATCTACCAATCCGACATGCGCGCCTCGGACCCTGTCGGAGGCTGCTACCGCTACATCCTCGACCTGCAGGCCCAGATCGAGTACTGCAGAGCCGAGCTGGAACTCGTCCTCCAACAGCTCGCCATGTTCCGAGCCCAGGCTCAGCACCAGAACCAGCACCAGTATCAGCACCAGCACGGTATGTATGCCCCCAACAGCGTTAACGTCACCGTCAACGGAGACGGCGAGGTTTTGAACGCCGACCCGATGGGGTTGTACGGGCAGCAACAGTATCAGTGTCTGCAGCCGCACCAACAGGATCAGCAGTATGTTATGATGCATGAAAATGGAACCACGCCTTTGCAGGAACAGATGAACACGTGGGCTGTGCAGAACACTGCTGTCTCGCTTTCTTCGTTGTCGTTGCAAGGACAGAGTAGTAATGTCAGCGATGAGTATGATCACAAGGCCGTGATTGACATTGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAAGCAGTGTTGTTTAAGATAGATGATGCAGTAATAAAAGGTGAGGGTGAGTGCATGCAACAAGCTCAAGATCATGATCTGAAAGGTGCAGCGACATCGTTTAGCCTCACAAATTGTACTTGCTGA 915 0.5202 MNRSLLLKRHNDVKMIISTTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVVSPRDKDQAMRTIIYQSDMRASDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQHQNQHQYQHQHGMYAPNSVNVTVNGDGEVLNADPMGLYGQQQYQCLQPHQQDQQYVMMHENGTTPLQEQMNTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKAVIDIDSDERSELGFESEELVHRSDEAVLFKIDDAVIKGEGECMQQAQDHDLKGAATSFSLTNCTC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02524 304 ProSiteProfiles LOB domain profile. 28 129 IPR004883 -
Viun10g02524 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 27 177 - -
Viun10g02524 304 Pfam Lateral organ boundaries (LOB) domain 29 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02524 Viun-Chr10 39157775 39159638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02524 28 146 AS2 family AT3G13850 75.630 1.47e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun10g02524 LOB 5.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02524 - - vum:124830493 515.383