Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02505 ATGAGAACAGAAGAAAAGCGAAAAGTCTTCGTATCCGTTTGTGTACTTTCTCTGTTCATTCACCTTTTTCTTTCCGCAAACATTTCAAATTTCAAAACACTTCTTCTACTTTTTCTTCTGCTTCTCGTTATATCTCAATTAAGCCAAGCAACAGCACCAGCTTCAAACTCAAACTCACTTCAAAGTCCACTTGGTGTTACCACCTTGTCATTTGCAAAAAAAGTGTTCTTTTCTCAAATGGGTGGTTCTGGGAGATGGCTTAAGTCGCTCATTTCGCTCAGGAAGCCATCGGCAACTGATCAAGAGAAGGGTGGTGACAAGAGTAAGAGAAAGTGGAAGTTATGGAGGGGCACTTCAGAAGGGTTTGGGATTGGATCATCCTTGCAGAAGGGGCAGAGTGGTGGTGGGTCCTTTGTGGTGGATGATGGGGCATTTGCTGCAGCTTTGGCTGCTGTGGTAAGAACTCCACTCAAAGATTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGAATCCAGGCAGTGTTTCGTGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGGAAGCAAGCAGCTGTTACTCTAAGATGTATGCAGGCTCTTGTGCGAGTTCAAGCGCGTGTCAAGGCAAGGAATGTGGGGAAAGGTGTCGGTGAGCCCTGCAATGAAGCTGACCCTGTTCAGCAAGCTGAGCAAGGATGGTGTAATATTCCAGGAACTGCGGAAGAAGTTAAAGCAAAATTACAGATGAGGCTGGAAGGAGCAGTTAAGAGGGATAGGACAAAGGCATACTCTCAGTCTAAGCAGAAATCAACAGTGAGTGCTAGTCCAAACTCAAAAGGTGCTAGGGCAGTGATTCCTCCTCTCAAGCACCGTAGTCTAGATAGTAAGAGCTCAGGATGGGGCATGTTAGATCGGTGGATGGATGCAAAACCATGGGAGAGCAGGTCGATGGTAGACATGTATTTGGACTCATCTGACATGACTCCAGCAGTGACTAGTAAAAGTGATCATTTTGTTCTTCCCTTGAATTCGGATCAACAAAATGGCTCAGTCAAAGCAAGAAGGAATGGTGTGACAACCAGGATTTCAGCTAAGTCACTTACGACTAGTCAATCAACTCCATCATCTTCATCCATAAGCTCTGAATGCATGTATGATGATAGCCCTTTGTCAACTTCATGCACATCTGAATCACCACCGGTGACATCTACCAACAATGTTATAGTGGACACAACAGAGGAAGGAAATGTTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAATTGAAACCCTATAGGTGCTTTTCTCAGAATTCTAAGAGAATTTTTATGGATGATTGTGTGTCACTCAGCGGAGTTACTAGAAGCAGTTCTGGTTCCTACCCTTCTGCTAATATGTGGAAGAATATCTATGCAACACCTTTAAGGACTTGTTATCAAAAGCAATATACAATGGAAGATAAGTAG 1530 0.4425 MRTEEKRKVFVSVCVLSLFIHLFLSANISNFKTLLLLFLLLLVISQLSQATAPASNSNSLQSPLGVTTLSFAKKVFFSQMGGSGRWLKSLISLRKPSATDQEKGGDKSKRKWKLWRGTSEGFGIGSSLQKGQSGGGSFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGKGVGEPCNEADPVQQAEQGWCNIPGTAEEVKAKLQMRLEGAVKRDRTKAYSQSKQKSTVSASPNSKGARAVIPPLKHRSLDSKSSGWGMLDRWMDAKPWESRSMVDMYLDSSDMTPAVTSKSDHFVLPLNSDQQNGSVKARRNGVTTRISAKSLTTSQSTPSSSSISSECMYDDSPLSTSCTSESPPVTSTNNVIVDTTEEGNVCKPSYMNLTASTKAKLKPYRCFSQNSKRIFMDDCVSLSGVTRSSSGSYPSANMWKNIYATPLRTCYQKQYTMEDK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02505 509 ProSiteProfiles IQ motif profile. 189 216 IPR000048 GO:0005515
Viun10g02505 509 ProSiteProfiles IQ motif profile. 165 193 IPR000048 GO:0005515
Viun10g02505 509 SMART iq_5 164 186 IPR000048 GO:0005515
Viun10g02505 509 SMART iq_5 187 208 IPR000048 GO:0005515
Viun10g02505 509 Gene3D - 162 218 - -
Viun10g02505 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 207 IPR027417 -
Viun10g02505 509 MobiDBLite consensus disorder prediction 273 299 - -
Viun10g02505 509 Pfam IQ calmodulin-binding motif 189 206 IPR000048 GO:0005515
Viun10g02505 509 Pfam IQ calmodulin-binding motif 167 186 IPR000048 GO:0005515
Viun10g02505 509 MobiDBLite consensus disorder prediction 377 401 - -
Viun10g02505 509 PANTHER IQ-DOMAIN 5-RELATED 80 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02505 Viun-Chr10 39057162 39060386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02505 80 492 IQD Protein Family AT1G72670 42.857 1.65e-84 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02505 - - vun:114166337 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03767 5 46419875 46422318 Viun10g02505 10 39057162 39060386 PCT