Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02498 ATGAGTTCCTCCACCAAAAAGCACGACGTGTTCGTGAGCTTCAGAGGAGAAGAAACACGAGCCAACTTCACCAGTCATCTTTACAAAGCTCTCGAAGATAAATCAATCGGAGCTTACATAGATTGCCAGCTAGACAGAGGAGTTGATGTCTGGCGGGGACTTGCCAAAGCAATTCAGGACTCACATGTTTCAATTGTTGTTTTCTCCGAAAACTATGCTTGTTCCAAATGGTGTTTGGATGAACTGGTGGAAATTCTTGAATGCAGAAAAAAACTGGGTTTGGTAGTTATACCTATCTTTTACAACGTAGATCCATCAGACATAAGGAATCAGAAGGGTACTTTCGAGAAGGAATTGACAGAACTGTTGGAATCCAATGAAGAGAAAGGGCCAAAGTGGAAAGCTGCTCTCACTGAAGCAGCCAATATATCTGGATGGGACGCTAGGACACATAGGGACGAAGCTCATGTCATTGAGAATGTTGTCAATGATGTGTTGCAAAAGCTTCATCTGCGATGCCCTACTGAGTTAAAGGGCCTTGTTGGAAATGAAGAAAATTGCAGAAATGTAGAATTATTACTAAAATCGTGTAGGGTCATTGGAATTTGGGGTATGGGTGGAATTGGTAAGTCCACCATTGCTAAAATCTTATTTGCTAAACATTTTCCCCAATATGACCATGTCTGCTTTGTAACCAATGCAAAAGAATATTCACTGGACAAGTTTTTCTCTACAATATTGAAGGAAGAGGTTTCCGCAAAAAATGTCGTAGGATCCTCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACATGGATAGTTTTGAGCCATTGGAGTATTTATGTGGAGAGTATGAAGGCCAGCATGGTGATAGTAAACTCGTTATAACAACAAGAGATAGGCAATTGCTTGTTGGAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTAAAGCTTTTTTGCTCAGAAGCCTTTAAGAAAAGTTATCCCGAAGGAGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCCGGTGGCGTTCCATTAGCCCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCTGTTTTTGGGAAAGTACTATAAGAAAACTCAGCTTCTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGAGCTACACTGCATTGCATGATCTAGAAAAAAATATATTTCTAGACATTGTATTTTTCTTTAGAGAAAAACAGAAAGATCATGTCACAAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTTGTAGACAAAGCTATGTTAACAATTTCATATAGAAACATACAAATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTACGTCAAGAATGTACAGCAGATCCTGGTAGACGTAGTCGATTGAAGGATAATGAAGCTCGTCAAGTGATTGAAGAAAACAAGGGAACTGATGCAGTTCAAGGAATAGAACTGGATTTGTCTCAAGTTCAAAATTTACGTTTGCGTTCTGACACAATGGCAAAGATGAAAAGCTTAAGATTTCTGAGATTCTATAACTCCTCAGGTCAGAGTTCTAGGAATACATACCTCGACCTTCCTACAACTCTTGAGCCGTTTTCTGATCAACTGAGGTACATTGAGTGGATTGGATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGAAACATGGCAAAGTTAAACAACTTTGGCAGGGAATCCAGGAACTAGATAACTTAGTGGGAATTGACCTAAGTGGATGCAAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCGCCAAGACTTAAATGGGTGAATCTCTCATGTTGTGAAAGTTTGCGGTATCTTCACTCATCTGTTTTATCCTCGGCAGCGCTTGTTACTTTGATACTGAATGGGTGTACAAAACTCCAGAGTGTTAAAGGCGAAAAGCGTTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTCAAGTCTGGAGGAATTTGCAGTGTCATTAGATTTATTTAAAATGTTTAATTTGAGCCACAAAGGAATCCAAATGCCAGGCACACCAGTAAGGCGAAAGGGAAAACGCAAGAGCCACAATTTAGAGGAGGATTTAAGACCCTTGACATCTTTGAAGGAGATCAAGCTATCTTATTGTCTACAACGTGATATGGATTGGATCAAGTACAACCTACCTTCATTACAGCATATGTACATGCTAAAGCTAGATCAATGCAAGGTGACAACGTTGCCTGAAAACATTAAGAATCTTGGAAACTTGAGAGTTTTGTCCTTGGAGAATTGTGACGAGCTTCTGCGTCTACCAAAGCTTCCATCCAGCATCAATTACTTTAGTGCCATTAACTGCACTTCACTGGTGTCAGTGTCAGACTTAGTCAATTTGGCAAATGAGATGTGGGGAAGTACCAGATTCCTCACATTCAAGAACTGCTTGAAATTGGATGAACATTCATGCAAACTTATAATGAAAAGCGTACAGTTAGTAATGGTGTGTGCTGCATTTGACAACATGGTGAGAAAATCCAGTGACCTCCACGACTACAGTTATAACAGTGTTCAGCTTTGTTTACCAGGAAGCAAGGTCCCACAAGAGATTAAATATAGGAGCACTGAGTCCTTCATTACCATTGACCTTCCCAAACTTTCCAACTTGAGGGGCTTCATTTACTCTGTGGTTCTTTCTCCATCTGGTGAAACGAAGAAGCATGGCACCAAGATTATATGTAAACGCCACTTGAGAGAAAATACGAGGGAATCATGGGTATCTAGTGATATCGAGGGATTGAACACGGATCATGTTTATATATGGTATGATCCATTCCACTGTGATGGCATTCTCAAATATAATGCACCAAGTGTTTGTTTTGAGTTCTGTGTTACAAATGATAAGGGGGAAGTTGATGACTCTATGTGTATTAAAGAGTGTGGTGTTGGCCTTATAAGCGTTTCAGAACTGCCAAGTGTTTTAGAAGAGTTGGACTGGGATTCAGATAAGAAGAAGGACTTAGTGAAGAGAGTGGAGTTAATAACAGGACAAAGGATAACCTTAACATCAATTGAACAATCTGATGAAGAAGAAAACAATGGCATGAAAAATCAGATGGGGAATCAACAAGGAAATTTGAGTGAACACAGTCATAAAATAGTTGGTACGGAATTAGACTCAAAGATGGTTGACTCGGATTCAGGTGAAGAAGGCAATGAGAGGAAAAACCATTATTCTGCTATAGAAGAGATTATCAATTCTACTCAGAAGGAAGTCAAAACTGATTCTGTCTCAAATTATAGGCAGAATACAGAGTCTGCAAATGTGGTCAAATACGAAGGAAATACAGAAAGGCCAATTAAACAAGATGCAACATTGCATGATACTGTTGAATCAGAGTTAGACAAAGAAAATGAGTCTAAAGAAAAGTCAAATTCAGTTGAAGACAATAGAGGGAGTAAAGAATATCCTTCTAGTGTTGAAGAGAGCATTGAATATTCTACTTGCAGTGCAACCAAGACAACTGCTAAAAGAGGTCCCAAAGAAAAATCTAAAAAGTCTACAGAAATTGTAGCGAATGAACATTCACAGAATGCACCACTTCAAGCCTCTTCCGAAGGGGACTCTGAGGACTTGCATAATAGGTTGGAAGAATCGATTAAGCAAGTTGTAGAAACTCATGATACAGGGAACTTTGCTACTAAATACTCATCTTTGGACCTTGAGAATTGCCTCCAACAGTTGAATGAAAATCCATTTGCAATCCTTGACTTACTTTCTTATGAACTATACCCTTCACTGAAACAATTAGAAACTTGTGTTCAAAAGGTGGCTCAAGCAAATGATGCTACAACTGTTCTCAATGAGTTCAGAACCTTAGTGTTCTCAAATTCGTTGCTAAAGAAACTTCAAGACCAATCCTATCGGCAACAAATTGCAGAATCACTACAGAAACTTCACACTTATCGTAGAGAAATTACAAAAGAGCAAGAAGCTGGTTTAGACAAATTTTTAGAGCTCTACAACAAAGCTGTTGACATTTCTCAAGATAAGATGTTAACCGAGGATAAACAAGCAAAACTGGCATATGAGAAGAGAGACTTGTACAACAAACTTCAAAATTCTAAACTGAAAGTTCAACAGTTTGACACCACCATCTCAACTTGTAAGTCTCAGAGGGAAAACCTCAAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAAGAAACTTCAACTAGAAAATGAAGCCTTGGAAAAGGAGAGCACAACACTAGAGGTTTTATACTCTGAACAACAAACCAAGAAGAACGAAACACTTGAATCAGTGAAGTGTATCTCGATTTCTGTTGTTCAAACAACCAAACAATTAGAAGAACTTGAAGAGAAAAGTTTGAGTTTGGCTTCAGCTTACGAAGGCCTCAAAGAGCCATATGAAAGAATGAAGACAAAACCCCCATTCTAG 4548 0.3881 MSSSTKKHDVFVSFRGEETRANFTSHLYKALEDKSIGAYIDCQLDRGVDVWRGLAKAIQDSHVSIVVFSENYACSKWCLDELVEILECRKKLGLVVIPIFYNVDPSDIRNQKGTFEKELTELLESNEEKGPKWKAALTEAANISGWDARTHRDEAHVIENVVNDVLQKLHLRCPTELKGLVGNEENCRNVELLLKSCRVIGIWGMGGIGKSTIAKILFAKHFPQYDHVCFVTNAKEYSLDKFFSTILKEEVSAKNVVGSSFHMRRLRSKKVFIVLDDVDMDSFEPLEYLCGEYEGQHGDSKLVITTRDRQLLVGRVDAIYEVQKWKKTESLKLFCSEAFKKSYPEGGYESLSESAVEYAGGVPLALKVLGSYLRSKGICFWESTIRKLSFYPNERIQKVLEVSYTALHDLEKNIFLDIVFFFREKQKDHVTRILDACGFEATSGIEVLVDKAMLTISYRNIQMHDLLQQMGLEIVRQECTADPGRRSRLKDNEARQVIEENKGTDAVQGIELDLSQVQNLRLRSDTMAKMKSLRFLRFYNSSGQSSRNTYLDLPTTLEPFSDQLRYIEWIGYPFECLPSPFCAKFLVEIHMKHGKVKQLWQGIQELDNLVGIDLSGCKQFEELPDLSKAPRLKWVNLSCCESLRYLHSSVLSSAALVTLILNGCTKLQSVKGEKRLKSLEKISVNGCSSLEEFAVSLDLFKMFNLSHKGIQMPGTPVRRKGKRKSHNLEEDLRPLTSLKEIKLSYCLQRDMDWIKYNLPSLQHMYMLKLDQCKVTTLPENIKNLGNLRVLSLENCDELLRLPKLPSSINYFSAINCTSLVSVSDLVNLANEMWGSTRFLTFKNCLKLDEHSCKLIMKSVQLVMVCAAFDNMVRKSSDLHDYSYNSVQLCLPGSKVPQEIKYRSTESFITIDLPKLSNLRGFIYSVVLSPSGETKKHGTKIICKRHLRENTRESWVSSDIEGLNTDHVYIWYDPFHCDGILKYNAPSVCFEFCVTNDKGEVDDSMCIKECGVGLISVSELPSVLEELDWDSDKKKDLVKRVELITGQRITLTSIEQSDEEENNGMKNQMGNQQGNLSEHSHKIVGTELDSKMVDSDSGEEGNERKNHYSAIEEIINSTQKEVKTDSVSNYRQNTESANVVKYEGNTERPIKQDATLHDTVESELDKENESKEKSNSVEDNRGSKEYPSSVEESIEYSTCSATKTTAKRGPKEKSKKSTEIVANEHSQNAPLQASSEGDSEDLHNRLEESIKQVVETHDTGNFATKYSSLDLENCLQQLNENPFAILDLLSYELYPSLKQLETCVQKVAQANDATTVLNEFRTLVFSNSLLKKLQDQSYRQQIAESLQKLHTYRREITKEQEAGLDKFLELYNKAVDISQDKMLTEDKQAKLAYEKRDLYNKLQNSKLKVQQFDTTISTCKSQRENLKKRQREIQEAIKKLQLENEALEKESTTLEVLYSEQQTKKNETLESVKCISISVVQTTKQLEELEEKSLSLASAYEGLKEPYERMKTKPPF 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02498 1515 PRINTS Disease resistance protein signature 265 279 - -
Viun10g02498 1515 PRINTS Disease resistance protein signature 359 373 - -
Viun10g02498 1515 PRINTS Disease resistance protein signature 782 798 - -
Viun10g02498 1515 PRINTS Disease resistance protein signature 199 214 - -
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1145 1187 - -
Viun10g02498 1515 Pfam NB-ARC domain 198 400 IPR002182 GO:0043531
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1189 1204 - -
Viun10g02498 1515 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 146 IPR035897 -
Viun10g02498 1515 Gene3D Ribonuclease Inhibitor 477 704 IPR032675 -
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1220 1236 - -
Viun10g02498 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 418 IPR027417 -
Viun10g02498 1515 Gene3D - 325 408 IPR042197 -
Viun10g02498 1515 SMART till_3 7 143 IPR000157 GO:0007165
Viun10g02498 1515 Coils Coil 1415 1456 - -
Viun10g02498 1515 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 171 - -
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1115 1140 - -
Viun10g02498 1515 Gene3D - 166 317 IPR027417 -
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1115 1241 - -
Viun10g02498 1515 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 695 IPR044974 GO:0006952
Viun10g02498 1515 Coils Coil 1471 1491 - -
Viun10g02498 1515 Gene3D Ribonuclease Inhibitor 705 865 IPR032675 -
Viun10g02498 1515 MobiDBLite consensus disorder prediction 1205 1219 - -
Viun10g02498 1515 Pfam TIR domain 7 174 IPR000157 GO:0007165
Viun10g02498 1515 Gene3D - 4 165 IPR035897 -
Viun10g02498 1515 ProSiteProfiles TIR domain profile. 6 169 IPR000157 GO:0007165
Viun10g02498 1515 SUPERFAMILY L domain-like 462 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02498 Viun-Chr10 38993906 39000607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02498 3 815 WRKY Transcription Factor Family AT4G12020 29.621 2.92e-80 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02498 - - vun:114166184 2962.56