Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02497 ATGAGTTCCTCCACCAAAAAGCACGACGTGTTCGTGAGCTTCAGAGGAGAAGAAACACGAGCCAACTTCACCAGTCATCTTTACAAAGCTCTCGAAGATAAATCAATCGGAGCTTACATAGATTGCCAGCTAGACAGAGGAGTTGATGTCTGGCGGGGACTTGCCAAAGCAATTCAGGACTCACATGTTTCAATTGTTGTTTTCTCCGAAAACTATGCTTGTTCCAAATGGTGTTTGGATGAACTGGTGGAAATTCTTGAATGCAGAAAAAAACTGGGTTTGGTAGTTATACCTATCTTTTACAACGTAGATCCATCAGACATAAGGAATCAGAAGGGTACTTTCGAGAAGGAATTGACAGAACTGTTGGAATCCAATGAAGAGAAAGGGCCAAAGTGGAAAGCTGCTCTCACTGAAGCAGCCAATATATCTGGATGGGACGCTAGGACACATAGGGACGAAGCTCATGTCATTGAGAATGTTGTCAATGATGTGTTGCAAAAGCTTCATCTGCGATGCCCTACTGAGTTAAAGGGCCTTGTTGGAAATGAAGAAAATTGCAGAAATGTAGAATTATTACTAAAATCGTGTAGGGTCATTGGAATTTGGGGTATGGGTGGAATTGGTAAGTCCACCATTGCTAAAATCTTATTTGCTAAACATTTTCCCCAATATGACCATGTCTGCTTTGTAACCAATGCAAAAGAATATTCACTGGACAAGTTTTTCTCTACAATATTGAAGGAAGAGGTTTCCGCAAAAAATGTCGTAGGATCCTCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACATGGATAGTTTTGAGCCATTGGAGTATTTATGTGGAGAGTATGAAGGCCAGCATGGTGATAGTAAACTCGTTATAACAACAAGAGATAGGCAATTGCTTGTTGGAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTAAAGCTTTTTTGCTCAGAAGCCTTTAAGAAAAGTTATCCCGAAGGAGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCCGGTGGCGTTCCATTAGCCCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCTGTTTTTGGGAAAGTACTATAAGAAAACTCAGCTTCTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGAGCTACACTGCATTGCATGATCTAGAAAAAAATATATTTCTAGACATTGTATTTTTCTTTAGAGAAAAACAGAAAGATCATGTCACAAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTTGTAGACAAAGCTATGTTAACAATTTCATATAGAAACATACAAATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTACGTCAAGAATGTACAGCAGATCCTGGTAGACGTAGTCGATTGAAGGATAATGAAGCTCGTCAAGTGATTGAAGAAAACAAGGGAACTGATGCAGTTCAAGGAATAGAACTGGATTTGTCTCAAGTTCAAAATTTACGTTTGCGTTCTGACACAATGGCAAAGATGAAAAGCTTAAGATTTCTGAGATTCTATAACTCCTCAGGTCAGAGTTCTAGGAATACATACCTCGACCTTCCTACAACTCTTGAGCCGTTTTCTGATCAACTGAGGTACATTGAGTGGATTGGATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGAAACATGGCAAAGTTAAACAACTTTGGCAGGGAATCCAGGAACTAGATAACTTAGTGGGAATTGACCTAAGTGGATGCAAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCGCCAAGACTTAAATGGGTGAATCTCTCATGTTGTGAAAGTTTGCGGTATCTTCACTCATCTGTTTTATCCTCGGCAGCGCTTGTTACTTTGATACTGAATGGGTGTACAAAACTCCAGAGTGTTAAAGGCGAAAAGCGTTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTCAAGTCTGGAGGAATTTGCAGTGTCATTAGATTTATTTAAAATGTTTAATTTGAGCCACAAAGGAATCCAAATGCCAGGCACACCAGTAAGGCGAAAGGGAAAACGCAAGAGCCACAATTTAGAGGAGGATTTAAGACCCTTGACATCTTTGAAGGAGATCAAGCTATCTTATTGTCTACAACGTGATATGGATTGGATCAAGTACAACCTACCTTCATTACAGCATATGTACATGCTAAAGCTAGATCAATGCAAGGTGACAACGTTGCCTGAAAACATTAAGAATCTTGGAAACTTGAGAGTTTTGTCCTTGGAGAATTGTGACGAGCTTCTGCGTCTACCAAAGCTTCCATCCAGCATCAATTACTTTAGTGCCATTAACTGCACTTCACTGGTGTCAGTGTCAGACTTAGTCAATTTGGCAAATGAGATGTGGGGAAGTACCAGATTCCTCACATTCAAGAACTGCTTGAAATTGGATGAACATTCATGCAAACTTATAATGAAAAGCGTACAGTTAGTAATGGTGTGTGCTGCATTTGACAACATGGTGAGAAAATCCAGTGACCTCCACGACTACAGTTATAACAGTGTTCAGCTTTGTTTACCAGGAAGCAAGGTCCCACAAGAGATTAAATATAGGAGCACTGAGTCCTTCATTACCATTGACCTTCCCAAACTTTCCAACTTGAGGGGCTTCATTTACTCTGTGGTTCTTTCTCCATCTGGTGAAACGAAGAAGCATGGCACCAAGATTATATGTAAACGCCACTTGAGAGAAAATACGAGGGAATCATGGGTATCTAGTGATATCGAGGGATTGAACACGGATCATGTTTATATATGGTATGATCCATTCCACTGTGATGGCATTCTCAAATATAATGCACCAAGTGTTTGTTTTGAGTTCTGTGTTACAAATGATAAGGGGGAAGTTGATGACTCTATGTGTATTAAAGAGTGTGGTGTTGGCCTTATAAGCGTTTCAGAACTGCCAAGTGTTTTAGAAGAGTTGGACTGGGATTCAGATAAGAAGAAGGACTTAGTGAAGAGAGTGGAGTTAATAACAGGACAAAGGATAACCTTAACATCAATTGAACAATCTGATGAAGAAGAAAACAATGGCATGAAAAATCAGATGGGGAATCAACAAGGAAATTTGAGTGAACACAGTCATAAAATAGTTGGTACGGAATTAGACTCAAAGATGGTTGACTCGGATTCAGGTGAAGAAGGCAATGAGAGGAAAAACCATTATTCTGCTATAGAAGAGATTATCAATTCTACTCAGAAGGAAGTCAAAACTGATTCTGTCTCAAATTATAGGCAGAATACAGAGTCTGCAAATGTGGTCAAATACGAAGGAAATACAGAAAGGCCAATTAAACAAGATGCAACATTGCATGATACTGTTGAATCAGAGTTAGACAAAGAAAATGAGTCTAAAGAAAAGTCAATGATGGTTGAACTAGATTCAGTTGAAGACAATAGAGGGAGTAAAGAATATCCTTCTAGTGTTGAAGAGAGCATTGAATATTCTACTTGCAGTGCAACCAAGACAACTGCTAAAAGAGGTCCCAAAGAAAAATCTAAAAAGTCTACAGAAATTGTAGCGAATGAACATTCACAGAATGCACCACTTCAAGCCTCTTCCGAAGGGGACTCTGAGGACTTGCATAATAGGTTGGAAGAATCGATTAAGCAAGTTGTAGAAACTCATGATACAGGGAACTTTGCTACTAAATACTCATCTTTGGACCTTGAGAATTGCCTCCAACAGTTGAATGAAAATCCATTTGCAATCCTTGACTTACTTTCTTATGAACTATACCCTTCACTGAAACAATTAGAAACTTGTGTTCAAAAGGTGGCTCAAGCAAATGATGCTACAACTGTTCTCAATGAGTTCAGAACCTTAGTGTTCTCAAATTCGTTGCTAAAGAAACTTCAAGACCAATCCTATCGGCAACAAATTGCAGAATCACTACAGAAACTTCACACTTATCGTAGAGAAATTACAAAAGAGCAAGAAGCTGGTTTAGACAAATTTTTAGAGCTCTACAACAAAGCTGTTGACATTTCTCAAGATAAGATGTTAACCGAGGATAAACAAGCAAAACTGGCATATGAGAAGAGAGACTTGTACAACAAACTTCAAAATTCTAAACTGAAAGTTCAACAGTTTGACACCACCATCTCAACTTGTAAGTCTCAGAGGGAAAACCTCAAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAAGAAACTTCAACTAGAAAATGAAGCCTTGGAAAAGGAGAGCACAACACTAGAGGTTTTATACTCTGAACAACAAACCAAGAAGAACGAAACACTTGAATCAGTGAAGTGTATCTCGATTTCTGTTGTTCAAACAACCAAACAATTAGAAGAACTTGAAGAGAAAAGTTTGAGTTTGGCTTCAGCTTACGAAGGCCTCAAAGAGCCATATGAAAGAATGAAGACAAAACCCCCATTCTAG 4563 0.3881 MSSSTKKHDVFVSFRGEETRANFTSHLYKALEDKSIGAYIDCQLDRGVDVWRGLAKAIQDSHVSIVVFSENYACSKWCLDELVEILECRKKLGLVVIPIFYNVDPSDIRNQKGTFEKELTELLESNEEKGPKWKAALTEAANISGWDARTHRDEAHVIENVVNDVLQKLHLRCPTELKGLVGNEENCRNVELLLKSCRVIGIWGMGGIGKSTIAKILFAKHFPQYDHVCFVTNAKEYSLDKFFSTILKEEVSAKNVVGSSFHMRRLRSKKVFIVLDDVDMDSFEPLEYLCGEYEGQHGDSKLVITTRDRQLLVGRVDAIYEVQKWKKTESLKLFCSEAFKKSYPEGGYESLSESAVEYAGGVPLALKVLGSYLRSKGICFWESTIRKLSFYPNERIQKVLEVSYTALHDLEKNIFLDIVFFFREKQKDHVTRILDACGFEATSGIEVLVDKAMLTISYRNIQMHDLLQQMGLEIVRQECTADPGRRSRLKDNEARQVIEENKGTDAVQGIELDLSQVQNLRLRSDTMAKMKSLRFLRFYNSSGQSSRNTYLDLPTTLEPFSDQLRYIEWIGYPFECLPSPFCAKFLVEIHMKHGKVKQLWQGIQELDNLVGIDLSGCKQFEELPDLSKAPRLKWVNLSCCESLRYLHSSVLSSAALVTLILNGCTKLQSVKGEKRLKSLEKISVNGCSSLEEFAVSLDLFKMFNLSHKGIQMPGTPVRRKGKRKSHNLEEDLRPLTSLKEIKLSYCLQRDMDWIKYNLPSLQHMYMLKLDQCKVTTLPENIKNLGNLRVLSLENCDELLRLPKLPSSINYFSAINCTSLVSVSDLVNLANEMWGSTRFLTFKNCLKLDEHSCKLIMKSVQLVMVCAAFDNMVRKSSDLHDYSYNSVQLCLPGSKVPQEIKYRSTESFITIDLPKLSNLRGFIYSVVLSPSGETKKHGTKIICKRHLRENTRESWVSSDIEGLNTDHVYIWYDPFHCDGILKYNAPSVCFEFCVTNDKGEVDDSMCIKECGVGLISVSELPSVLEELDWDSDKKKDLVKRVELITGQRITLTSIEQSDEEENNGMKNQMGNQQGNLSEHSHKIVGTELDSKMVDSDSGEEGNERKNHYSAIEEIINSTQKEVKTDSVSNYRQNTESANVVKYEGNTERPIKQDATLHDTVESELDKENESKEKSMMVELDSVEDNRGSKEYPSSVEESIEYSTCSATKTTAKRGPKEKSKKSTEIVANEHSQNAPLQASSEGDSEDLHNRLEESIKQVVETHDTGNFATKYSSLDLENCLQQLNENPFAILDLLSYELYPSLKQLETCVQKVAQANDATTVLNEFRTLVFSNSLLKKLQDQSYRQQIAESLQKLHTYRREITKEQEAGLDKFLELYNKAVDISQDKMLTEDKQAKLAYEKRDLYNKLQNSKLKVQQFDTTISTCKSQRENLKKRQREIQEAIKKLQLENEALEKESTTLEVLYSEQQTKKNETLESVKCISISVVQTTKQLEELEEKSLSLASAYEGLKEPYERMKTKPPF 1520
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02497 1520 SUPERFAMILY L domain-like 462 853 - -
Viun10g02497 1520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 695 IPR044974 GO:0006952
Viun10g02497 1520 MobiDBLite consensus disorder prediction 1145 1192 - -
Viun10g02497 1520 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 146 IPR035897 -
Viun10g02497 1520 MobiDBLite consensus disorder prediction 1142 1246 - -
Viun10g02497 1520 PRINTS Disease resistance protein signature 359 373 - -
Viun10g02497 1520 PRINTS Disease resistance protein signature 782 798 - -
Viun10g02497 1520 PRINTS Disease resistance protein signature 199 214 - -
Viun10g02497 1520 PRINTS Disease resistance protein signature 265 279 - -
Viun10g02497 1520 Pfam TIR domain 7 174 IPR000157 GO:0007165
Viun10g02497 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 418 IPR027417 -
Viun10g02497 1520 SMART till_3 7 143 IPR000157 GO:0007165
Viun10g02497 1520 Pfam NB-ARC domain 198 400 IPR002182 GO:0043531
Viun10g02497 1520 MobiDBLite consensus disorder prediction 1194 1209 - -
Viun10g02497 1520 Coils Coil 1476 1496 - -
Viun10g02497 1520 Gene3D Ribonuclease Inhibitor 705 865 IPR032675 -
Viun10g02497 1520 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 171 - -
Viun10g02497 1520 Coils Coil 1420 1461 - -
Viun10g02497 1520 Gene3D Ribonuclease Inhibitor 475 704 IPR032675 -
Viun10g02497 1520 Gene3D - 4 165 IPR035897 -
Viun10g02497 1520 ProSiteProfiles TIR domain profile. 6 169 IPR000157 GO:0007165
Viun10g02497 1520 Gene3D - 325 408 IPR042197 -
Viun10g02497 1520 Gene3D - 166 317 IPR027417 -
Viun10g02497 1520 MobiDBLite consensus disorder prediction 1210 1224 - -
Viun10g02497 1520 MobiDBLite consensus disorder prediction 1225 1241 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun10g02497 Viun-Chr10 38993782 39000607 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02497 3 815 WRKY Transcription Factor Family AT4G12020 29.621 2.58e-80 291
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02497 - - vun:114166184 2999.92