Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02469 ATGTCAGACCCGAAGACCCGGACCCGAACTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTCTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTCGAAGAGGCCCGCCGCAAGCGCCGCTCCTGGGGCGAGAACCTCACCTTCTACACCGGATGCGGCTACCTAGCCGGAGCCCTCGGCGGTGGCGGCTCAGGACTCGTAGAGGGTGTCAGGGCCTTCGAGTCCGGTGATACAGCGAAGCTCCGAATCAACCGCGTCCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTAGGGTTACTCTACGCTGGAATCGAGAGCGGAATCGAGGCAGCGAGAGACGCGGACGACGTATGGAATAGCGTCGCAGCGGGACTCGGCACCGGCGCACTGTACCGGGCGGCGAGAGGGGTGAGATCAGCGGCGGTAGCCGGAGCGGTGGGCGGCGTTGTCGTGGGAATGGCCGTGGCGGGGAAGCAAGCGTTGAAACGATACGTGCCTATATGA 537 0.635 MSDPKTRTRTYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGALGGGGSGLVEGVRAFESGDTAKLRINRVLNAAGHSGRVWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGMAVAGKQALKRYVPI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02469 178 Pfam Tim17/Tim22/Tim23/Pmp24 family 52 161 - -
Viun10g02469 178 PANTHER TIM23 20 166 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02469 Viun-Chr10 38763370 38764405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02469 8 178 Chloroplast and Mitochondria Gene Families AT1G72750 67.816 2.18e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02469 K17794 - gmx:100777112 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03751 5 46303369 46304333 Viun10g02469 10 38763370 38764405 PCT