Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun10g02430 | ATGACATATTCTAATTCTTTCCGAGTTTTTGATAGAATCAAACGTGTAATATTTGTTTGTGTCTTGCTGGCAGCGATAGACAATAATAATAGTAATAATTCTTCATATCCAGTGACAGATTTTGCTTATCACAATGACTCCCTTCAGATAAAGTACGATGTGTTTGTTAGCTTCAGAGGCACAGATATCCGGCAAGATTTCCTTAGCCATTTGATTGAGGCGTTTTCTCAAAGGCATATTAATGCGTTTGTAGATAACAAGATTGTCAAAGGAGATGTACTGTCTGAAGCACTTATTCGTGCAATTGAAGGATCATCAATTTCATTGATTATATTTTCACAGGACTATGCTTCTTCACACTGGTGTTTGTCAGAGCTTGTGAAAATTGTTGAGTGTAGAAGAACAAATGGCCAGATTGTATTACCTATCTTCTACAAAGTGGATCCTTCACATGTACGATATCAGAAAGGGTCTTACGAACATGCCTTCGCTAAACATCAAATAAGATATAGTTTGAGCACTATGCAAATCTGGAGAACTGCTTTGACTGAAGCTGCTAATCTATCAGGATTTCATTCATCAACATTTAGGGACGAAGCTGAGTTTATGAAAGAGATAGTTAAGTGCGTATTGATGAGGTTGAACCAAGTGCAACAAGTTAAATCCAGAGGACTTGTTGGAATTGGTAAACGAATTGCACATGTTGAATTACTGCTACAATCAGAAGAGCCTGATGTACGTATTATTGGAATATGGGGCATGGGTGGCATTGGTAAAACAACCATTGCAGAAGAAGTATATAACAAGTTGTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGAGAAGAATCGGGAAGACATGGAATAATGTCTTTGAAGAAAAAGCTTTTCTCAACATTATTAGGAGGAGAAGATTTGAAAATTGACACACCTAATGGATTGCCTCAATATATTGAGAGAAGGCTTCGACGTATGAAAGTTCTCATAATTCTTGATGATGTCAATGATTCAGATCAACTGGAAGTTTTAGCTGGAACACATGATTGGTTTGGATCAGGTAGCAGAATCATCATAACAACCAGAGATAAACAGGTACTTGCTAAAGAGTTTGCTAGTATATATAAGGTTGAGGCATTAAACTTTGATGAATCCTTAAGGCTTTTCAATTTGAATGCCTTTAAGCAAAATCATCTTGAAAGTGAGTACCATGAGCTTTCAAAGAAAGTGGTCAACTATGCCAAAGGGATTCCACTAGTTCTTAAAGTTTTGGGTCATCTTCTTCATGGAAAAGATAAGGAAACTTGGGAAAGCCAATTGGAAAGACTCAAAAAAGTGCAAAACAGAAAGGTCCATGATATGATTAAATTGAGTTACAATGATCTTGATCGGGATGAAAAGAAGATATTTTTAGATATTGCATGCTTTTTCGATGGACTGAATCTGAAGGTAAAGCATATAAATTTTTTATTGAAAGACCATGATTATTCAGTGGTTGCCGGATTAGAAAGGTTGAAGGATAAAGCTCTAATCACTGTTTCTCAAGAAAATGGTGTTTCAATGCACAACATTATACAAGAAACAGCTTGGCAGATTGCTCGAGAAGAATCAATTGAAGATCCCAGAAGCCAGATTCAACTATTGGATCCTGAGGACATTTATCATGTGCTAAACTATAATAAGGGTGACGAGGCTATCAGAAGCATAGTCATCAACTTGTCAAGAATCAAACAACTGCAATTAAACCCTCAAGTATTTGCAAGGATGAGCAAACTTCATTTTCTAGACTTTTATAGTAAAGGGTCTTGTAGTTGCCTCGGGGATCAAGGAGGCTTGTATCTTCCACAAGGACTTGAATCTTTATCAAATGAACTAAGATATCTTCGTTGGACCCATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCTGCTGAAAATCTTGTTGAATTGAACTTGCCACATAGCCGACTGAAAAAACTTTGGCAAGAAGCACCGGACCTTGTTAACTTGAGGGTCCTTATACTTCATTCATCAACAAGACTAAAGGAGCTACCAAACTTTTCAAAGGCCACAAACCTTAAAGCGATAGATCTCAGATTTTGTGTAGGGCTGACTAGTGTGCATTCATCAATTTTCTCTCTTAGAAATCTTGAGAAATTGGATCTGGGTGGCTGCATTTCCCTTAGAAGCCTACGAAGCAATGTCCATTTGGACTCCCTTCGTTATCTCTCCCTCTATGGATGCATGTCACTGAAGGATTTCTCAGTGACCTCAAAGAATATGGTAAAGTTGAATTTAGAACTCACTGGTATCAAGCAACTACCTTCATCATTTGGACTTCAAAGCAACCTCCAAAAGCTACGTTTGGCATACACTTACATTGACAACTTGCCAACAAGTATCAAGCATCTCACAAGGCTGCGACATCTTGATCTAAGATATTGCAGAGAGCTTAGAACTCTACCAGAGCTTCCACCATCACTTGAAACACTAGATGCCCGTGGATGTGTGTCACTTGAGAGTGTAATGTTCCCTTTTGCTGTTAGTGAACAACTGAAGGAAAATAAGAAAAGAGTTGCTTTCTGGAACTGCTTGAAATTGGATGAACCTTCTCTCAATGCTATTGAGTTGAATGCACAAATCAACATGATGAAATTTGCACATCAACATTTTTCCCTATTTGGGGATGCTCAAAGCACCTATGTATATCCTGGAAGTAAAGTTCCAAAATGGCTGGTGCATAAGACCACACATGATGACTTCGTGATTATGGATCTCTCTTCTGTTCTTTCTCCGCACTCCTCACACATAGGCTTCATTTTTGGCTTTGTTGTTCCGGAAGTCCCATTTGGGGGTTTGGCTTTGGAATTTAGGATTAGTACTGGTGGTGAAGGTGGCGAAGGTAGCCATATCAATGTGTACGTGGACAGACCACGACATGGTATCACATCGGATCATGTGTATCTAATGTATGACCAGGCATGTTCTCACTATCTAAACAGTCGTGCCAAACATGAGCCAAGGTTGAAAATTAAGGTTGCATTGGCATCGCGAACACTTACATCCAAGTACGTACCATTAGAGCTAAAAGCTTTTGGGATCAGCCTAATCAATACTACAGACTTTCTTAGTTTTGTTCAAAATGTCAAATTTGGTGACAATGTTCCAAATGTCCCTATTTTGCCAAAGTTTTTCTGTCCTTTCTGCATTGTTGTTTTTGTTGGGACTCTTAATATTTGTATCAGAAGATTGGTGTAG | 3264 | 0.3802 | MTYSNSFRVFDRIKRVIFVCVLLAAIDNNNSNNSSYPVTDFAYHNDSLQIKYDVFVSFRGTDIRQDFLSHLIEAFSQRHINAFVDNKIVKGDVLSEALIRAIEGSSISLIIFSQDYASSHWCLSELVKIVECRRTNGQIVLPIFYKVDPSHVRYQKGSYEHAFAKHQIRYSLSTMQIWRTALTEAANLSGFHSSTFRDEAEFMKEIVKCVLMRLNQVQQVKSRGLVGIGKRIAHVELLLQSEEPDVRIIGIWGMGGIGKTTIAEEVYNKLCFEYEGCCFLANIREESGRHGIMSLKKKLFSTLLGGEDLKIDTPNGLPQYIERRLRRMKVLIILDDVNDSDQLEVLAGTHDWFGSGSRIIITTRDKQVLAKEFASIYKVEALNFDESLRLFNLNAFKQNHLESEYHELSKKVVNYAKGIPLVLKVLGHLLHGKDKETWESQLERLKKVQNRKVHDMIKLSYNDLDRDEKKIFLDIACFFDGLNLKVKHINFLLKDHDYSVVAGLERLKDKALITVSQENGVSMHNIIQETAWQIAREESIEDPRSQIQLLDPEDIYHVLNYNKGDEAIRSIVINLSRIKQLQLNPQVFARMSKLHFLDFYSKGSCSCLGDQGGLYLPQGLESLSNELRYLRWTHYPLESLPSKFSAENLVELNLPHSRLKKLWQEAPDLVNLRVLILHSSTRLKELPNFSKATNLKAIDLRFCVGLTSVHSSIFSLRNLEKLDLGGCISLRSLRSNVHLDSLRYLSLYGCMSLKDFSVTSKNMVKLNLELTGIKQLPSSFGLQSNLQKLRLAYTYIDNLPTSIKHLTRLRHLDLRYCRELRTLPELPPSLETLDARGCVSLESVMFPFAVSEQLKENKKRVAFWNCLKLDEPSLNAIELNAQINMMKFAHQHFSLFGDAQSTYVYPGSKVPKWLVHKTTHDDFVIMDLSSVLSPHSSHIGFIFGFVVPEVPFGGLALEFRISTGGEGGEGSHINVYVDRPRHGITSDHVYLMYDQACSHYLNSRAKHEPRLKIKVALASRTLTSKYVPLELKAFGISLINTTDFLSFVQNVKFGDNVPNVPILPKFFCPFCIVVFVGTLNICIRRLV | 1087 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun10g02430 | 1087 | Pfam | Leucine Rich Repeat | 648 | 665 | IPR011713 | - | |
Viun10g02430 | 1087 | SMART | till_3 | 51 | 188 | IPR000157 | GO:0007165 | |
Viun10g02430 | 1087 | Pfam | TIR domain | 51 | 220 | IPR000157 | GO:0007165 | |
Viun10g02430 | 1087 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 47 | 191 | IPR035897 | - | |
Viun10g02430 | 1087 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 219 | 475 | IPR027417 | - | |
Viun10g02430 | 1087 | SUPERFAMILY | L domain-like | 571 | 855 | - | - | |
Viun10g02430 | 1087 | Gene3D | - | 49 | 212 | IPR035897 | - | |
Viun10g02430 | 1087 | Gene3D | - | 381 | 465 | IPR042197 | - | |
Viun10g02430 | 1087 | ProSiteProfiles | TIR domain profile. | 50 | 214 | IPR000157 | GO:0007165 | |
Viun10g02430 | 1087 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 48 | 216 | - | - | |
Viun10g02430 | 1087 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 52 | 840 | IPR044974 | GO:0006952 | |
Viun10g02430 | 1087 | Gene3D | Ribonuclease Inhibitor | 738 | 869 | IPR032675 | - | |
Viun10g02430 | 1087 | Gene3D | Ribonuclease Inhibitor | 558 | 737 | IPR032675 | - | |
Viun10g02430 | 1087 | Gene3D | - | 213 | 377 | IPR027417 | - | |
Viun10g02430 | 1087 | SUPERFAMILY | "Winged helix" DNA-binding domain | 452 | 559 | IPR036390 | - | |
Viun10g02430 | 1087 | PRINTS | Disease resistance protein signature | 804 | 820 | - | - | |
Viun10g02430 | 1087 | PRINTS | Disease resistance protein signature | 416 | 430 | - | - | |
Viun10g02430 | 1087 | PRINTS | Disease resistance protein signature | 324 | 338 | - | - | |
Viun10g02430 | 1087 | PRINTS | Disease resistance protein signature | 248 | 263 | - | - | |
Viun10g02430 | 1087 | Pfam | NB-ARC domain | 236 | 459 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun10g02430 | Viun-Chr10 | 38538531 | 38543560 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun10g02430 | 52 | 825 | WRKY Transcription Factor Family | AT4G12020 | 33.885 | 1.97e-110 | 377 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun10g02430 | - | - | gmx:100802823 | 1719.13 |