Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02429 ATGCAATTAGAAGCAACAGATGTTCGCATGATTGGAATATGGGGCATGGGTGGTATTGGTAAGACAACTATTGCACAAGAGGTATATGATAAAATGTGTTTTAAATATGACAGTTGTTGTTTTTTGGCTAACATAAGGGAGGAGTCAGGGAGACATGGAATGAACTTTTTGAAGGAAAAGCTTTTTTCAAAATTATTAAGAGAAGAAAACATGAATATTGGCACACCTGATGGGTTCCAGAAGTTAGTCGAGAGAAGATTTCATCGCATGAAGGTTCTTATTGTTCTGGATGATGTCGATGACTCAGAGCAGCTAGAAAAGTTAGCTAGAACAGATTGGTTTGTCTATGGCAGTAGAATCATTGTGACAACCAGAGATAAACAGGTGCTTGCTACGGAGTCTGCAAATGTATACCATGCTGAGGCCTTAAACTTTGATGAATCTCTGCGACTTTTCAATTTAAATGCCTTTAAGAAAAAACATGTAGAGGCAGAGTACGAGGAGCTGTCAAAGAAAGCAGTTAATTACGCCAAAGGCATTTCGCTTGTTCTTAAAGTTCTGGGTCACCGTCTTCATGGGAAAGATAAAGAGATATGGGAAAGTGAATTGGAAAGAGAAGGAGTGCACAACAAAAAGGTTCATGATATTATTAAATCGAGTTACTATGATCTTGAGGAGGATGAAAAGAGGATGTTTTTGGATATTGCATGTTTTTTTTACGGGCAGCAACTGCAGGTGAAGTACATAGATTTTTTATTGAAAGATCGTGATTATTCAGTGGTTGCGGGATTGGAAAGGTTGAAGGATAAAGCTTTTATCAGTATTTCTCAAGAAAATACTGTATCGATGCATGACATTATACGAGAAACCGCTTGGCAGATTGCTGGCCAAGAATCTATTGAAGACCCCAGAAGCCAGGTTCGACTATTTGATCCTGACGACATTTACAGAGTACTAACATACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCGTGAACTTGTTGAGAATCAAACAACTACATTTAAAGCCACATGTATTTACTAAGATGAGCAAGCTCCACTTTCTGAATATTTACACTGCAGGAACTCGCGATATTCGCTTCTATGAACCGTGGGGCTTGTATCTTCATCAAGGGCTTGAATCTCTGCCGAATGAGCTAAGATATCTTGGTTGGGCTCATTATCCTTTGGAATCTTTGCCTTCAAACTTCTCTGCAGAAAATCTAGTCGAGTTGCACTTGCCATATAGCCGGCTGAAAAAATTATGGCAAGAAGTGCCAGTAAATAATATACGTATTCCTTTTAATCTAAAATTAACATTAATCCAAGCAAAGTCTTGA 1344 0.3847 MQLEATDVRMIGIWGMGGIGKTTIAQEVYDKMCFKYDSCCFLANIREESGRHGMNFLKEKLFSKLLREENMNIGTPDGFQKLVERRFHRMKVLIVLDDVDDSEQLEKLARTDWFVYGSRIIVTTRDKQVLATESANVYHAEALNFDESLRLFNLNAFKKKHVEAEYEELSKKAVNYAKGISLVLKVLGHRLHGKDKEIWESELEREGVHNKKVHDIIKSSYYDLEEDEKRMFLDIACFFYGQQLQVKYIDFLLKDRDYSVVAGLERLKDKAFISISQENTVSMHDIIRETAWQIAGQESIEDPRSQVRLFDPDDIYRVLTYNKGNEAIRSIVVNLLRIKQLHLKPHVFTKMSKLHFLNIYTAGTRDIRFYEPWGLYLHQGLESLPNELRYLGWAHYPLESLPSNFSAENLVELHLPYSRLKKLWQEVPVNNIRIPFNLKLTLIQAKS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02429 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 235 IPR027417 -
Viun10g02429 447 Gene3D - 142 225 IPR042197 -
Viun10g02429 447 PRINTS Disease resistance protein signature 86 100 - -
Viun10g02429 447 PRINTS Disease resistance protein signature 10 25 - -
Viun10g02429 447 PRINTS Disease resistance protein signature 177 191 - -
Viun10g02429 447 Pfam NB-ARC domain 6 201 IPR002182 GO:0043531
Viun10g02429 447 Gene3D Ribonuclease Inhibitor 319 441 IPR032675 -
Viun10g02429 447 SUPERFAMILY "Winged helix" DNA-binding domain 211 319 IPR036390 -
Viun10g02429 447 Pfam Leucine Rich Repeat 409 427 IPR011713 -
Viun10g02429 447 Gene3D - 1 139 IPR027417 -
Viun10g02429 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 437 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02429 Viun-Chr10 38530785 38537035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02429 1 425 WRKY Transcription Factor Family AT4G12020 34.660 1.50e-68 235