Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02397 ATGGCACTAGATTTGACATCACTGACTTGTGTGGCAGCGTTTCTCGTTGTCCTCCTCTTCCTCCGCCGTCTCCGCCGCCGCCGATACAACCTCCCGCCGGGCCCAAAGCCCTGGCCCATTATAGGCAATCTCAATCTAATCGGTTCCCTCCCACACCGGTCCATCCACGGGCTCACTCAAAAATACGGGCCCATCATCCACGTCTGGTTCGGGTCAAACCCGGTGGTGGTAGGGTCATCTGTGGAGATGGCAAAGGCCATTCTGAAAACCCACGACGCCACCATCGCTGGCAGGCCCAAATTCTCTGCGGGCAAGTACACCACCTACAACTACTCCAACATAACCTGGTCCCAGTACGGCCCATACTGGCGCCAGGCCCGTAGAATGTGCCTGATGGAGTTGTTCAGCGCAAAACGCCTGGAAGAATACGAATACATCAGAAAACAAGAGTTGCGCGGTCTGGTCAACGAACTCTTCAATTCCGCAAACAAAACCGTTTTACTAAAAGACCACCTTTCCAGTTTGAGTCTGAACGTTATAAGTCGCATGGTGTTGGGGAAGAAGTACCTGGAGGAGTCCGAAAACGCCGTCGTTTCGCCCGACGAGTTTAAGAAGATGCTCGACGAGTTGTTTTTGCTTAATGGGGTGTTGAACATCGGAGACTTTATTCCCTGGATTAACTTCTTGGACCTGCAGGGTTACATAAAGAGGATGAAGACCCTGAGCAAGAAGTTCGACAGGTTCATGGAACACGTCTTGGACGAACATATTGAGAGGAAGAAAGGTGTTAAGGATTATGTCGCAAAGGACATGGTCGATGTTCTTCTGCAACTTGCCGAAGATCCCACTCTTGAGGTCAAGCTCGAGAGGCATGGCGTCAAGGCTTTTACCCAGGACCTGATAGCAGGTGGGACTGAGAGTTCTGCTGTGACGGTGGAATGGGCAATCTCAGAGCTATTGAAAAAACCAGAGATTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTGATAGGAAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAATTTACCTTATGTGAATGCCATTGCAAAGGAAGTGATGAGGTTGCACCCTGTGGCACCAATGCTGGTGCCAAGAATTGCGAGAGAGGATTGCCATATTGGAGGGTATGACATCCCTAAAGGGACTCAAGTGCTTGTGAATGTGTGGACTATTGGAAGAGACCCTGCAATTTGGGACAACCCTAATGAATTCCAACCAGAGAGGTTTCTGGGTAAGGAGATTGATGTGAAAGGGCATGACTACGAGTTGCTGCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGGTACCCTCTTGGCCTTAAGGTCATTCAAGCAAGTTTGGCCAATCTCTTGCATGGTTTTAACTGGAACCTGCCTCAGAATATGAAGAAAGAGGATTTGAACATGGAAGAGATTTTTGGGTTGTCTACACCTAAGAAAATACCTCTGGAAACAGTTCTTCAACCTAGACTTCCACACCATCTTTATTCTCTCTGA 1524 0.4888 MALDLTSLTCVAAFLVVLLFLRRLRRRRYNLPPGPKPWPIIGNLNLIGSLPHRSIHGLTQKYGPIIHVWFGSNPVVVGSSVEMAKAILKTHDATIAGRPKFSAGKYTTYNYSNITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKQELRGLVNELFNSANKTVLLKDHLSSLSLNVISRMVLGKKYLEESENAVVSPDEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKTLSKKFDRFMEHVLDEHIERKKGVKDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLKKPEIFKKATEELDRVIGRERWVEEKDIVNLPYVNAIAKEVMRLHPVAPMLVPRIAREDCHIGGYDIPKGTQVLVNVWTIGRDPAIWDNPNEFQPERFLGKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQASLANLLHGFNWNLPQNMKKEDLNMEEIFGLSTPKKIPLETVLQPRLPHHLYSL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02397 507 CDD CYP71_clan 63 492 - -
Viun10g02397 507 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 FunFam Cytochrome P450 84A1 23 500 - -
Viun10g02397 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Viun10g02397 507 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 PANTHER CYTOCHROME P450 98A9 8 506 - -
Viun10g02397 507 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02397 507 Pfam Cytochrome P450 32 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02397 Viun-Chr10 38253863 38256453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02397 2 507 Cytochrome P450 AT5G07990 43.191 4.12e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02397 K20623 - gmx:100790480 928.317