Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02394 ATGGCTTCTTCTCACACCTCTCCCCTCTCTCTTCTATCGTTCCTCTTTCTTATACTTCTGTCTGTTCTTGTTTCTGTCTCATCCTCATCGGACGCTCCACGAACCTACATAGTCCACGTGGCGCAATCGCAGAAGCCCACGCTTTTCTCCACACACCACCACTGGTACACTTCCATCCTCCGCTCCCTCCCTATCCCCCAACCAGCCACCCTCCTCTACACCTACTCCGCCGCTGCCGCCGGCTTCTCCGTCCGCCTCACGCCGTCGCAGCTCTCTCACCTCCGCAGCCACCCCGCCGTCCTCGCCGTCGAGCCCGACCAGGTCCGCCACCCCCACACCACCCACACCCCGCGGTTCCTCGGCCTCGCCGACTCCTTCGGCCTCTGGCCCAACTCCGACTACGCGGATGACGTCATCATCGGCATCCTCGACACCGGAATATGGCCGGAGTTGAAGAGCTTCAACGACGACAACCTCTCTCCTGTTCCCTCCACATGGAAAGGATCTTGCGAAGCCTCACGCGACTTCCCCGCTTCCTCCTGCAATAAAAAAATCATCGGCGCCAAAGCCTTCTACAAAGGCTACGAAGCCTACCTCGACGGACCAATCGATGAATCCGAGGAATCGAAGTCTCCGCGAGACACCGAAGGCCACGGCTCGCACACCTCTTCCACAGCCGCAGGCGCCGTCGTTTCCAACGCCAGTTTGTTTCATTACGCTCAAGGCGAAGCCAGAGGAATGGCCACAAAAGCGAGAGTCGCGGCTTACAAGATCTGCTGGCAATACGGTTGCTTTGATTCCGATATCCTTGCCGCCATGGACGAGGCTGTCGCCGACGGAGTTCACGTGATTTCGCTCTCCGTCGGTGCGTCGGGTTACTTGCCGCAGTATTTCCGTGATTCGATCGCTCTGGGAGCTTTCGGCGCTGCTCGTCACAATGTTCTGGTTTCGTGTTCCGCTGGGAACTCAGGGCCTGGTCCCTCCACTGCCGTGAACATCGCACCATGGATTTTAACCGTTGGAGCTTCCACAATCGATCGAGATTTTCCTGCTACTGTTGTTCTCGGAGATGGGAGGGTTTTCCGTGGGGTGTCTTTGTATTACGGTGAAAGTTTGCCTGATTTTAAGCTTCCATTAATATATGCTAGAGATGCTGGGAACAGGTACTGTTACATGGGGTCTCTGCAACCTTCTAAAGTTCAGGGGAAGATTGTTGTTTGCGACAGGGGTGGGAATGCTAGGGTTGAGAAGGGGAGTGCAGTGAAGCTTGCCGGTGGGTTGGGAATGATTTTGACAAACCCTCCCGAGAATGGTGAAGAGCTTCTCGCTGATGCACATCTTTTGGCAGCTACCATGGTGGGTCAAATTGCAGGGGATGCGATCAAGGAGTATATAAGGTCGAGTCAGTACCCAACTGCGACTATTGAGTTTAAAGGAACTGTAATTGGGGGTTCTCCTTCTGCTCCTCAAGTTGCTTCATTTTCTAGCCGTGGACCCAACCGTCTCACGCCGGAGATTCTCAAACCTGATGTCATTGCTCCCGGTGTTAACATTTTGGCAGGGTGGACTGGGAAAGTGGGGCCTACGGATCTGGACATTGATCCTAGGAGGGTCGAGTTTAACATTATTTCGGGGACTTCTATGTCGTGTCCTCATGTCAGTGGTATTGCTGCATTGCTTAGGAAAGCCTATCCTGAGTGGTCACCTGCGGCTGTTAAGTCTGCTTTGATCACAACTGCTTATACTGTGGATAATTCTGGAGAGAATATTAAGGATCTTGGAACTGGGAAGGACTCAAATCCGTTTGTCCATGGGGCTGGTCATGTTGATCCCAATAGGGCTCTTAACCCTGGGTTGGTTTATGATTCTGATATCGATGACTATTTGGCGTTTTTGTGCTCTATTGGGTATGATGCATATCAGATTGCGGTTTTCACTAGAGACCCTGCAGCAAACGTTTGTGAAGAGAAAGAGGGTAAGTTTGCTAGTCCCGGTGATTTGAATTACCCTTCTTTCGCTGTGCAGTTGGGTGAGGGAAACAATTTGGTCAAGTATAAAAGGGTTGTTACTAATGTGGGAAGTGTTGTTGATGCTGTCTACACTGTGAAAGTGAATGCTCCACCTGGTATTGCTGTTACAGTGTCCCCCACCACACTTGTGTTCAGTGCTGAAAACAAGACACAGGCTTTTGAGGTTGCTTTTAGTAGAATCACGTCCCAGGTTTCTGCCACTTTTGGGTCAATTGAATGGAGTGATGGAAGTCACGTTGTGAGGAGTCCAATTGCTGTTACATGGAGATTGAATGGTGATTCCTCATCATCCTTTTGA 2328 0.5168 MASSHTSPLSLLSFLFLILLSVLVSVSSSSDAPRTYIVHVAQSQKPTLFSTHHHWYTSILRSLPTXPQPATLLYTYSAAAAGFSVRLTPSQLSHLRSHPAVLAVEPDQVRHPHTTHTPRFLGLADSFGLWPNSDYADDVIIGILDTGIWPELKSFNDDNLSPVPSTWKGSCEASRDFPASSCNKKIIGAKAFYKGYEAYLDGPIDESEESKSPRDTEGHGSHTSSTAAGAVVSNASLFHYAQGEARGMATKARVAAYKICWQYGCFDSDILAAMDEAVADGVHVISLSVGASGYLPQYFRDSIALGAFGAARHNVLVSCSAGNSGPGPSTAVNIAPWILTVGASTIDRDFPATVVLGDGRVFRGVSLYYGESLPDFKLPLIYARDAGNRYCYMGSLQPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILTNPPENGEELLADAHLLAATMVGQIAGDAIKEYIRSSQYPTATIEFKGTVIGGSPSAPQVASFSSRGPNRLTPEILKPDVIAPGVNILAGWTGKVGPTDLDIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPEWSPAAVKSALITTAYTVDNSGENIKDLGTGKDSNPFVHGAGHVDPNRALNPGLVYDSDIDDYLAFLCSIGYDAYQIAVFTRDPAANVCEEKEGKFASPGDLNYPSFAVQLGEGNNLVKYKRVVTNVGSVVDAVYTVKVNAPPGIAVTVSPTTLVFSAENKTQAFEVAFSRITSQVSATFGSIEWSDGSHVVRSPIAVTWRLNGDSSSSF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02394 776 Gene3D - 633 766 - -
Viun10g02394 776 CDD PA_subtilisin_like 353 476 - -
Viun10g02394 776 Pfam Peptidase inhibitor I9 35 111 IPR010259 -
Viun10g02394 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 764 IPR045051 -
Viun10g02394 776 FunFam Subtilisin-like protease SBT1.5 138 360 - -
Viun10g02394 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Viun10g02394 776 FunFam subtilisin-like protease SBT1.5 347 483 - -
Viun10g02394 776 SUPERFAMILY PA domain 374 470 IPR046450 -
Viun10g02394 776 ProSiteProfiles Serine proteases, subtilase domain profile. 118 616 - -
Viun10g02394 776 SUPERFAMILY Subtilisin-like 112 620 IPR036852 GO:0004252|GO:0006508
Viun10g02394 776 Gene3D Peptidase S8/S53 domain 138 629 IPR036852 GO:0004252|GO:0006508
Viun10g02394 776 Pfam PA domain 378 462 IPR003137 -
Viun10g02394 776 MobiDBLite consensus disorder prediction 204 225 - -
Viun10g02394 776 Gene3D - 347 483 - -
Viun10g02394 776 FunFam Subtilisin-like protease SBT1.9 24 113 - -
Viun10g02394 776 SUPERFAMILY Protease propeptides/inhibitors 33 111 - -
Viun10g02394 776 CDD Peptidases_S8_3 111 582 IPR034197 -
Viun10g02394 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Viun10g02394 776 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Viun10g02394 776 MobiDBLite consensus disorder prediction 204 218 - -
Viun10g02394 776 Pfam Subtilase family 137 589 IPR000209 GO:0006508|GO:0008236
Viun10g02394 776 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Viun10g02394 776 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Viun10g02394 776 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Viun10g02394 776 FunFam Subtilisin-like protease SBT1.5 633 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02394 Viun-Chr10 38219409 38222536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02394 9 766 Subtilisin-like Serine Gene Family AT3G14067 65.144 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02394 - - gmx:100793990 1266.14