Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02393 ATGAAAGCGCCAAATACCTTTTTTGGTGCACAAAATAGAAGTTTTCGTGGGGTTTTCAACGTTTTGTGTGTTGGGGTTTTGTTTTTCTTCTTTTACAATCGCGACGACATCATTCGCAACCCGATTCTTAGGCAATCCTCCTATTTTGTTGGCCACAAGTTGCCTCAAAATGCGATTTTTAGAGATGGGTCTTCTGTGATTCACCGTCGAATGGTTGAAATCGGTGCCAATACTTCAAGTGTTGCCGGTGAGGATGATTTAGGTGCGAGTAATTCTGGATTCTGTTCTGGGTTTGTCCACCATGATGGTTATGCCAGTCCCTGTGAATTCTTAAAGGTGAATCCACAGTGCTCTTCTGATGGGTATCTTGATTACTTGAAATTTTTCTATTGTACATGTCAGGGTTTTAGAGTTTTTGGTTATCTAGGGTTGGTTGTATGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCAGACTACTTTTGCCCTTCACTTGAGAGTTTGTCAAGGCTCTTGAAATTGCCACCAACCGTAGCTGGGGTTGTGTTGCTTCCACTTGGGAATGGAGCACCTGATGTGTTTGCTAGTATAGCTTCTTTTGTGGGTGCTGAAAGTGGTGAGGTTGGTCTTAACAGTGTGTTGGGTGGTGCTCTTTTTGTTACCACTGTTGTTGTTGGAACTGTGTCGCTATGCGTTGCGGAGAAGGAGGTTGGAATTGATCGAAGATGCTTTATAAGGGATGTGAGTTTCTTTCTCCTGACTCTGTTTTCGCTGCTTTTGATTCTGGTTGCTGGTAAGGTGGGTGTTATGGCGGCCATTGCTTTTGTATCCATTTATTTTGTGTATGCGTTCATTGTTGCTGCGAATGAGATATTGAGGAAGCATGCACAGAGATTGAAATTAGATGTTGTGACACCATTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTGGGCGTGGAAGATGATATTCCGATGTATAGCTCTTTGCTTGAAGACACTGAAAGCGATCCTCCCCGCCTCCCTCCATCGTTGCCCCAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAATCAAAGCAGCAAAATCAACTTTTTGGATGATGAAAGGCCTCCCTGGGGATGGAGTGATGGGTCTGGGGAGAACACCAGAGCGTCCTTCTCAGTTTCAAAACTTTTTCTGCTGATGGAGATTCCACTTGCTATTCCCAGGCGATTCACAATTCCAATGGTCAATGAAGAAGTATGGTCAAAACCTTATGCTGTCATCAGTGCTTCATTGTCTCCCATTCTCCTTGGCCTTTTGTTTAACACCAGAGACAATGTGAGTAATCATGGTGTTATTCTTTCTTATTGTGTTGGTGTTGCTCTTGGATGCACATTTGGTGTTCTGGCCTATAAATACACAGTCTCTGATCATCCACCACGCCAGTTTTTGCTTGCTTGGGTACTTGGAGGATTCATCATGAGCATAGTGTGGTTCTACATAATAGCAAACGAGCTTGTGGCTCTATTGGTAGCATTTGGTGTAATTTTCGGAATTAACCCATCCATCTTGGGGTTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATATTGCATTGGCATTGGATGGAGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTATTGGTTTGGGAATCTCGCTGCTGCTTGGTGCCTGGTCTAAGAAACCCTCTTTGTACGTGCTTCCTGAAGATAGCAGCTTATTTTACACCATGGGATTTCTGATCGCAGGACTGCTATATGCACTTGTTTTGCTACCTACCAAGAACATGCATCCTAACAGAACGTTAGGAATGGGTCTCATCACCCTTTATGTGGTATTTCTTTCTTTCAGGATATGCACTGCAATGGGATTTATGACAGCTGCTGGTTTAAGTTGA 1953 0.4337 MKAPNTFFGAQNRSFRGVFNVLCVGVLFFFFYNRDDIIRNPILRQSSYFVGHKLPQNAIFRDGSSVIHRRMVEIGANTSSVAGEDDLGASNSGFCSGFVHHDGYASPCEFLKVNPQCSSDGYLDYLKFFYCTCQGFRVFGYLGLVVWLAALFYLLGNTAADYFCPSLESLSRLLKLPPTVAGVVLLPLGNGAPDVFASIASFVGAESGEVGLNSVLGGALFVTTVVVGTVSLCVAEKEVGIDRRCFIRDVSFFLLTLFSLLLILVAGKVGVMAAIAFVSIYFVYAFIVAANEILRKHAQRLKLDVVTPLLPVQGSVFSLGVEDDIPMYSSLLEDTESDPPRLPPSLPQWMWSSNVAIYSNQSSKINFLDDERPPWGWSDGSGENTRASFSVSKLFLLMEIPLAIPRRFTIPMVNEEVWSKPYAVISASLSPILLGLLFNTRDNVSNHGVILSYCVGVALGCTFGVLAYKYTVSDHPPRQFLLAWVLGGFIMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNIALALDGEDGVQIALSGCYAGPMFNTLIGLGISLLLGAWSKKPSLYVLPEDSSLFYTMGFLIAGLLYALVLLPTKNMHPNRTLGMGLITLYVVFLSFRICTAMGFMTAAGLS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02393 650 Pfam Sodium/calcium exchanger protein 145 288 IPR004837 GO:0016020|GO:0055085
Viun10g02393 650 Pfam Sodium/calcium exchanger protein 485 637 IPR004837 GO:0016020|GO:0055085
Viun10g02393 650 Gene3D - 425 638 IPR044880 -
Viun10g02393 650 Gene3D - 176 309 IPR044880 -
Viun10g02393 650 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02393 Viun-Chr10 38210710 38213297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02393 78 644 Antiporters AT5G17860 42.531 1.02e-142 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02393 K13754 - gmx:100796101 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02393 10 38210710 38213297 Viun10g02393 10 38210710 38213297 ECH