Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02392 ATGTCTGCACCGATGATCATTGACCCTGTGGTGATATCGGCACCAGAATCTCAATCAGCAGCTAGCATACTAGTTGCACAAAGTGAAGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAAAGAATCAGGGAGAGGTACCATGGAAAATGGGTTTGTGGATTGTGTGCTGAGGCTGTTAAGGATGAAATTGTAAGGTCTGAGAGGCTTGTTTGCACAGAAGAAGCAATGGCAAAGCACATGAACTTCTGCAAAAAGTTCAAGGCATCAGGGCCTCCTCCAAATCCAACAGTGCATTTGATATCTGCTATGAGACAAATTCTTAGGAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCGAATAGTCCAACCAAGACTATCACAGAAATCCATGGTTCTGTGCTTGCAAGGTCTGAGAGCTGCTTCTCTACCCTCACTGAAGGATTGGGATGA 483 0.4513 MSAPMIIDPVVISAPESQSAASILVAQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVCTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILRRSLDSPRVRSTPNSPTKTITEIHGSVLARSESCFSTLTEGLG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02392 160 Pfam Protein of unknown function (DUF1677) 30 119 IPR012876 -
Viun10g02392 160 PANTHER OS01G0745000 PROTEIN 22 157 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02392 Viun-Chr10 38204846 38206375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02392 - - gmx:100803697 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03224 9 39341965 39342728 Viun10g02392 10 38204846 38206375 ECH
Viun10g02392 10 38204846 38206375 Viun10g02392 10 38204846 38206375 ECH
Viun10g02392 10 38204846 38206375 Viun9g03222 9 39338361 39339851 ECH
Viun10g02392 10 38204846 38206375 Viun8g00668 8 5365885 5367285 ECH