Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02382 ATGAGTGTTACACAACACAAGTCTCTTCTCTTCATTTCTTCATTTCATTTTTCCACATATCGCATTTTTCTTTTACCCCAAAAGCCCACTTTTTTCCACACCTCTCTCTTTCTCCATTATTCGGACAAAAGCTATCTCTTTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTGTCTCTGTCTGTCTCCGCCGCTTGATTCCGTTCATCATGGAGAGCCTCCCGCTCGAGACGGCGGAGAAGATCATTCTGCGGTGGGATTCCACGGCGTCGGAGGATGCCAGGGACAAGATGATATTCTCCGGCGACCGGGACGAGGCGGATCTCTACCTGCAGGCGGTGGACGAAATCCAGAGGTCCCTCTCCTCCGTTTCGGTGTCGGAGAAAGTCAACTCGGCCATCCAGATCGCCATGGCCCGCTTAGAAGACGAGTTCCGGAACATCCTCATCTCCCACACCAACCCCTTCGACCCCACCACAGAAGACGAAGCCTCACAAACCCTTGACCCTCCTTCTTCTTCATCCTCTCCCAAACACCCTGACAACGACGAAAGCGACGAAGTTACCCAAACTTCTCTCCTCCGTTTCAACAGCGACGGCGCTGCTTCCTCCGTCACGGGAAGCTACCGCTCAACCAGCAGCATCCGCGAGATCGATCTCATCCCCTCCGACGCCGTCTACGACCTCCGCTGCATCGCCGAACGCATGGTCTCCTCCGGCTACTTGCGCGAGTGCATCCAGGTGTACGGCAGCGTCAGGAAATCCTCCGTCGACGCCAGCTTCCGCAAGCTCGGAATCGAGAAGCTCAGCATCGGCGACGTGCAGCGCCTCCAGTGGGAGCAGCTCGAGAACAAAATCAGACGCTGGATACGAGCCGCGAAAGTCTGCGTCAGGACGCTCTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTCGATGGAGTTGGAACCTCCATCGATGACGCTTGCTTCATGGAGACTGTCAAGGGCCCGGCGATTCAGCTCTTCAACTTCGCCGAGGCGATTAGTATTAGCCGGAGGTCACCGGAGAAGTTGTTCAAGATTCTGGATTTGCACGATGCGTTGACGGAGTTGATGCCGGATATTGATGTCGTGTTTGATTCCAAGTCCTCGGAGACGATTAGGGTTCAGGCAGCGGAGATTTTGTCGAGGTTGGGGGAGGCTGCGAGGGGGATTTTGTCGGAGTTTGAGAACGCTGTGCTCAAGGAACCCTCTAGGGTTCCTGTTCCCGGTGGGACGATTCACCCTTTGACTCGGTATGTGATGAACTACATAAGTTTGATCTCCGATTACAAGGTTACTCTGAACGAGCTTATAGTGTCTAAGCCCTCCACGGGGTCTAGGTATTCGGGTGATCCTGGGATACCCGATTTGGATTTGAGTGAGTTTGAGGAGAAGACCCCTTTGGATGTGCACTTGATTTGGATTATTGTGATATTACAATTCAACTTGGATGGGAAGAGTAAGCACTACAAGGACGCGTCTTTGGCTCATTTGTTTGTGATGAACAATGTGCACTACATTGTGCAGAAGGTGAGGGGTAGTCCAGAGTTGAGGGAGATGATCGGGGATGACTATTTGAAGAAGCTCACCGGAAAGTTCAGGCAGGCAGCGACGAGCTACCAGAGAGCAACGTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGAGGGTTTTCTTCTGGGGTGTCCAAGAGTGCTCTCAGGGAGAGGTTTAAGGCTTTTAACGCCATGTTTGAAGAGGTTCACAGGACTCAGGCGGTGTGGTTGATACCGGATTCGCAACTAAGGGAGGAGCTGAGGATATCGATATCGGAGAAGCTGATTCCGGCGTATAGGTCGTTTCTTGGAAGGTTCAGGAGCCACATAGAGAGTGGTAGGCATCCGGAGAATTACATAAAGTACTCTGTTGAGGACCTGGAAGATGCTGTTTTGGACTTTTTTGAAGGTGTTCCTGTTTCCCAGCACTTGAGGAGGAGATCTGAATGA 2040 0.5196 MSVTQHKSLLFISSFHFSTYRIFLLPQKPTFFHTSLFLHYSDKSYLFYSLSLSLSLSLSLSFSVSVCLRRLIPFIMESLPLETAEKIILRWDSTASEDARDKMIFSGDRDEADLYLQAVDEIQRSLSSVSVSEKVNSAIQIAMARLEDEFRNILISHTNPFDPTTEDEASQTLDPPSSSSSPKHPDNDESDEVTQTSLLRFNSDGAASSVTGSYRSTSSIREIDLIPSDAVYDLRCIAERMVSSGYLRECIQVYGSVRKSSVDASFRKLGIEKLSIGDVQRLQWEQLENKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTELMPDIDVVFDSKSSETIRVQAAEILSRLGEAARGILSEFENAVLKEPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGSRYSGDPGIPDLDLSEFEEKTPLDVHLIWIIVILQFNLDGKSKHYKDASLAHLFVMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGVPVSQHLRRRSE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02382 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 667 IPR004140 GO:0000145|GO:0006887
Viun10g02382 679 Pfam Exo70 exocyst complex subunit 293 661 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun10g02382 679 MobiDBLite consensus disorder prediction 157 193 - -
Viun10g02382 679 SUPERFAMILY Cullin repeat-like 109 666 IPR016159 -
Viun10g02382 679 MobiDBLite consensus disorder prediction 157 183 - -
Viun10g02382 679 Gene3D Exocyst complex component Exo70 87 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02382 Viun-Chr10 38113418 38115940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02382 81 679 EXO70 exocyst subunit family AT1G72470 71.057 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02382 K07195 - gmx:100808671 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02382 10 38113418 38115940 Viun10g02382 10 38113418 38115940 ECH