Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02381 ATGCAGGGGTCAGAAGAAAAAACAAGGGAAAAACGAAAAATTAGCAGAAGCAATGACCCGAAAAAAATCACAATCACATTCCTTAGTTTCGGATACGCCCTGAGGCGCCAGATTTTGAGCAGAGTAATGGCCATAGCTCCGGCAACAATTCTCCGGCCAACTCTCATGATCATCGTCACTTTGCCCGTCATATATTCCATGACAGAAGCTGAAGCTTTGGTAAGTCTCAAAAGCACTTTCTCCAACGCTCAAATTTTAAACGGTTGGGTGGCTGGTTCTGCACCTTGCAGTGTAGAAGATCAATGGGAAGGTGTTGTTTGCAACAATGGCCTTGTCACGGGGCTTCGCCTTGGAGGAATAGGGTTAGTCGGAGAAATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGAACTATTAGCCTTAACAACAACTCTTTCACAGGTTCCATGCCGGAGTTCAACCGAATAGGCTTCCTGAAAGCCTTGTATTTGCAGGGAAACAAGTTTTCTGGGGATATTCCTCCGGAATACTTCCAGAGAATGAGGTCTTTGAAGAAAGTGTGGCTTTCTGATAACCAATTCACGGGGAGCATTCCACATTCATTGACCGAGATTTCTAATCTTATGGAGTTGCACCTTGAAAACAACCAGTTTAGTGGAACCATTCCTGATTTCAAAAACCCGACCCTGGAGCACATTAATCTTTCCAACAACAAATTGGAAGGTGAAGTTCCAGCTAGTTTGTTGAGATTCAGCGAGAGCATGTTTTCTGGGAATTCTGGTCTTTGTGGTGAGAAGATCGGAAAATCATGTGAAAAGCCGGTGGAGGCGCCAAGTCCTGCTCCCATTGATGCACCGGAAGCAGTAAGTGTTGGTGGTGGTGGTGGTGGTGGTGCGACTGTGCCACATAGTAATACCCCATGGGAGGTTGCAGCCATTATAATAGTGAGTGTAGTGCTTGTTTCAATAGTTGTATTTTTCATTGTGAGAACAAGACAAAAGAAGGAGGAGGCGCGGCTTGATATGCTTGGAAATGATGCTAATGGCGGTGGTGGTTCGGTGGAAGTTCAAGTGGCTACCACATCGGCGAAAAGGGATGTGGATGCAAGTTCATGTACATCAATTAAAAAATCATCGTCCAAAAGAGGATCTGCAGGTTCTCAAAATAAAGGCGTCGGAGAACTTGTGATAGTGAATGACGAGAAGGGTGTGTTTGGGTTGCCAGATTTGATGAGAGCAGCAGCAGAAGTTCTGGGAAATGGAAGCTTTGGATCTTCTTACAAAGCCGTCATGGCTAATGGAGTGTCAGTGGTGGTGAAAAGGACCAGAGAGATGAATGTTCTGGAAAAAGATGCTTTTGATGCAGAGATGAGGAAGCTCTCATCGCTTAAACACTGGAACATATTGACCCCTTTAGCTTACCATTTCAGAAAGGATGAGAAACTAGTGATCTCAGAGTATGTTCCCAAAAGCAGTCTCCTCTTTTCACTGCATGGTGATAGAGGACCAACACATACGGAGCTGGATTGGCCTGCACGTATGAAAGTTATAGGTGGAATTGCCGAAGGGATGAACTATCTTCACAAAGAACTTGGTTCTTCAGATCTCCCACATGGCAATCTCAAATCCAGCAACGTTCTTCTGGGACCAGACAACGAAGCACTACTTGCAGATTACGGGTTCAGCCGCATGGTTAACCCTTCAAGTGCAGCACAGACACTATTTGCTTACAAGGCACCAGAGGCAGCAGAACACGGCGAAATTTCACATAGCTGTGATGTTTACTGTCTCGGGATTGTGATACTCGAAATACTCACTGGGAAATTTCCTTCGCAATATCTAAGCACTGGCAAAGGTGGAACCGATGTGGTGCAATGGGTTGAAACAGCAATCACTGAGGGTAGGTTGGCCGAAGTGGTTGATCCTGAAATCGCAGCTTCTAGAAAATCGGTAGGTGAAATGGAGCAACTCCTGCTCATTGGTTCTGCTTGCACCAGAAGCAGCCCTCTGCAACGGTTAGGCATGGAGGAAGCGTTTAGAAGAATAGATAAGGTACGATCCGAGAGTGGGGTTGGCAAAGAATCAAGAACAATAGAGGTGTTGCCAGCTTTCGGAGATGACTATGAAGCTGCAGAGCAATTTGAGAACCAATCACATAGGAGACATGGAACAGATAGTTTCGGAAGTGCGGATAGTATTGAACTTTGA 2211 0.4545 MQGSEEKTREKRKISRSNDPKKITITFLSFGYALRRQILSRVMAIAPATILRPTLMIIVTLPVIYSMTEAEALVSLKSTFSNAQILNGWVAGSAPCSVEDQWEGVVCNNGLVTGLRLGGIGLVGEIHVDPLLELKGLRTISLNNNSFTGSMPEFNRIGFLKALYLQGNKFSGDIPPEYFQRMRSLKKVWLSDNQFTGSIPHSLTEISNLMELHLENNQFSGTIPDFKNPTLEHINLSNNKLEGEVPASLLRFSESMFSGNSGLCGEKIGKSCEKPVEAPSPAPIDAPEAVSVGGGGGGGATVPHSNTPWEVAAIIIVSVVLVSIVVFFIVRTRQKKEEARLDMLGNDANGGGGSVEVQVATTSAKRDVDASSCTSIKKSSSKRGSAGSQNKGVGELVIVNDEKGVFGLPDLMRAAAEVLGNGSFGSSYKAVMANGVSVVVKRTREMNVLEKDAFDAEMRKLSSLKHWNILTPLAYHFRKDEKLVISEYVPKSSLLFSLHGDRGPTHTELDWPARMKVIGGIAEGMNYLHKELGSSDLPHGNLKSSNVLLGPDNEALLADYGFSRMVNPSSAAQTLFAYKAPEAAEHGEISHSCDVYCLGIVILEILTGKFPSQYLSTGKGGTDVVQWVETAITEGRLAEVVDPEIAASRKSVGEMEQLLLIGSACTRSSPLQRLGMEEAFRRIDKVRSESGVGKESRTIEVLPAFGDDYEAAEQFENQSHRRHGTDSFGSADSIEL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02381 736 Pfam Protein kinase domain 417 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02381 736 ProSiteProfiles Protein kinase domain profile. 413 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02381 736 Pfam Leucine Rich Repeat 231 250 IPR001611 GO:0005515
Viun10g02381 736 Gene3D Ribonuclease Inhibitor 159 274 IPR032675 -
Viun10g02381 736 MobiDBLite consensus disorder prediction 370 390 - -
Viun10g02381 736 MobiDBLite consensus disorder prediction 714 728 - -
Viun10g02381 736 SUPERFAMILY Protein kinase-like (PK-like) 417 681 IPR011009 -
Viun10g02381 736 Gene3D Phosphorylase Kinase; domain 1 392 488 - -
Viun10g02381 736 SUPERFAMILY L domain-like 94 251 - -
Viun10g02381 736 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Viun10g02381 736 Gene3D Ribonuclease Inhibitor 63 156 IPR032675 -
Viun10g02381 736 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 60 690 IPR046959 -
Viun10g02381 736 Gene3D Transferase(Phosphotransferase) domain 1 490 701 - -
Viun10g02381 736 MobiDBLite consensus disorder prediction 714 736 - -
Viun10g02381 736 MobiDBLite consensus disorder prediction 370 388 - -
Viun10g02381 736 FunFam Nuclear pore complex protein NUP107 66 225 - -
Viun10g02381 736 MobiDBLite consensus disorder prediction 275 301 - -
Viun10g02381 736 Pfam Leucine rich repeat N-terminal domain 69 108 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02381 Viun-Chr10 38102873 38106139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02381 48 686 Receptor kinase-like Gene Family AT3G42880 44.717 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun10g02381 Pkinase 3.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02381 - - var:108346415 1250.34