Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02360 ATGGCTAATGAAGGAAACAAAAGCAATGACTTCTATACGATCTTGGGGTTGAACAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAGAAGAAATTCCAGGAAATTGGGGAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTTGGTGTCTACGATAGTGATGACGACGAAAACGGTATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGTTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATAGGATTGGATGGAAGCCCTTCTCTTTCTTCTGCCAATTGCTCTAATTCATCATCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGCCAGAGGATTCCTCTGTCTTTGACACCAGTTACCAGAATTTCTGTTTTGGGACAGGTGAACCTACACCAAGATATAGAGGAGGAAAAGGAGGGAATTCCAGAAGGAGGAGGTAG 624 0.4119 MANEGNKSNDFYTILGLNKECTELELKNAYKKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFEDMFQADIGLDGSPSLSSANCSNSSSYMTYSESSSSNKRNSTEMKFGKPEDSSVFDTSYQNFCFGTGEPTPRYRGGKGGNSRRRR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02360 207 MobiDBLite consensus disorder prediction 137 207 - -
Viun10g02360 207 CDD DnaJ 10 70 IPR001623 -
Viun10g02360 207 MobiDBLite consensus disorder prediction 137 164 - -
Viun10g02360 207 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Viun10g02360 207 Gene3D DnaJ domain 7 134 IPR036869 -
Viun10g02360 207 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Viun10g02360 207 SMART dnaj_3 9 73 IPR001623 -
Viun10g02360 207 PRINTS DnaJ domain signature 53 73 IPR001623 -
Viun10g02360 207 PRINTS DnaJ domain signature 73 92 IPR001623 -
Viun10g02360 207 PRINTS DnaJ domain signature 12 30 IPR001623 -
Viun10g02360 207 PRINTS DnaJ domain signature 30 45 IPR001623 -
Viun10g02360 207 Pfam DnaJ domain 10 78 IPR001623 -
Viun10g02360 207 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Viun10g02360 207 PANTHER PUTATIVE, EXPRESSED-RELATED 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02360 Viun-Chr10 37942018 37945173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02360 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 6.46e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02360 - - gmx:100779251 314.694