Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02359 ATGGCTAATGAAGGAAACAAAAGCAATGACTTCTATACGATCTTGGGGTTGAACAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAGAAGAAATTCCAGGAAATTGGGGAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTTGGTGTCTACGATAGTGATGACGACGAAAACGAAAATGGAGAGGAGAGTTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATAGGATTGGATGGAAGCCCTTCTCTTTCTTCTGCCAATTGCTCTAATTCATCATCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGCCAGAGGATTCCTCTGTCTTTGACACCAGTTACCAGAATTTCTGTTTTGGGACAGGTGAACCTACACCAAGATATAGAGGAGGAAAAGGAGGGAATTCCAGAAGGAGGAGGTAG 567 0.4145 MANEGNKSNDFYTILGLNKECTELELKNAYKKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENENGEESFEELQQLFEDMFQADIGLDGSPSLSSANCSNSSSYMTYSESSSSNKRNSTEMKFGKPEDSSVFDTSYQNFCFGTGEPTPRYRGGKGGNSRRRR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02359 188 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Viun10g02359 188 CDD DnaJ 10 70 IPR001623 -
Viun10g02359 188 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Viun10g02359 188 SMART dnaj_3 9 73 IPR001623 -
Viun10g02359 188 MobiDBLite consensus disorder prediction 118 145 - -
Viun10g02359 188 MobiDBLite consensus disorder prediction 118 188 - -
Viun10g02359 188 Gene3D DnaJ domain 7 115 IPR036869 -
Viun10g02359 188 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Viun10g02359 188 PANTHER PUTATIVE, EXPRESSED-RELATED 91 160 - -
Viun10g02359 188 Pfam DnaJ domain 10 78 IPR001623 -
Viun10g02359 188 PRINTS DnaJ domain signature 30 45 IPR001623 -
Viun10g02359 188 PRINTS DnaJ domain signature 12 30 IPR001623 -
Viun10g02359 188 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02359 Viun-Chr10 37942012 37945173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02359 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 5.12e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02359 - - gmx:100779251 248.825