Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02352 ATGGAAGTGCTTCTTGGAGATGGGATATTTAATGTTGATGGTGAGAGTTGGAAGAAACAAAGAAAAACTGCAAGCTTAGAGTTTGCATCCAGAAATTTAAGGGAATTTAGCACCAAAGTTTTCAGGGAATATGCCTTGAAACTTTCTGCCATTCTCAGTCATGCATCTATTCTTAACCAAGAAATAGACATGCAGGAACTGTTGATGAGGATGACTTTGGACTCCATATGTAAGGTTGGATTTGGAGTGGAAATTGGAACACTATCTTCCAATTTACCAAAGAATACTTTTGCTGATGCATTTGACACTGCAAATATCATAGTAACACTTCGCTTCATTGATCCACTTTGGAAGATCAAAAAAATTTTAAGTATAGGCTCTGAAGCACAACTTGAGAAGAGTATCAAAGTTGTTGATGATTTCACCTACTCAGTGATTCGGAAAAGGAAGGCAGAGATAGAAGATGTCAGAAAAAGTGGACAACAAAATCAGATGAAGCATGATATATTATCAAGATTCATAGAACTAGGAGAAAGCAATGCAACGGACAAGAGTTTGAGAGATATTGTGTTGAACTTTGTGATTGCTGGGAGAGACACAACTGCAACAACCCTGTCATGGGCCATATACATGGTAATGACACATGCTCATGTTGCTGAAAAACTTTACCTGGAGCTGAAACTTTTTGAGGAGAATCATGCAAAAGAACAGAACATTTCCTTGCCTCAATGTGACAAAGAGGACTCAGAATCATTCAATCAAAGAGTAGAGCAATTTTCAAGGCTTTTGAATAAAGATTCACTAGAGAGATTGCACTATCTGCATGCTGTCATAACAGAGACCTTAAGATTGTATCCAGCAGTTCCTCAGGATCCTAAGGGCATATTAGAGGATGATGTATTGCCAGATGGAACGAAAGTAAAGGCAGGAGGTATGGTAACATATGTTCCATACTCTATGGGAAGGATGGAATATAATTGGGGTCCTGATGCAGCTTCATTTGTCCCTGAGAGATGGTTCAAAGATGGTGTTCTAAAGAACGAGTCTCCATTCAAATTCACTGCTTTTCAGGCAGGCCCTAGGATATGCCTTGGCAAGGACTCTGCATATCTGCAGATGAGAATGGTGCTAGCTATTTTGTGCAGATTTTACAAGTTCAACTTGGTGCCAGGTCACACAGTTAAATATAGGATGATGACAATATTATCCATGGCTCATGGCTTGAAAGTTACCATACACAAACGTTGTTGA 1251 0.3909 MEVLLGDGIFNVDGESWKKQRKTASLEFASRNLREFSTKVFREYALKLSAILSHASILNQEIDMQELLMRMTLDSICKVGFGVEIGTLSSNLPKNTFADAFDTANIIVTLRFIDPLWKIKKILSIGSEAQLEKSIKVVDDFTYSVIRKRKAEIEDVRKSGQQNQMKHDILSRFIELGESNATDKSLRDIVLNFVIAGRDTTATTLSWAIYMVMTHAHVAEKLYLELKLFEENHAKEQNISLPQCDKEDSESFNQRVEQFSRLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFVPERWFKDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVPGHTVKYRMMTILSMAHGLKVTIHKRC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02352 416 Pfam Cytochrome P450 5 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 SUPERFAMILY Cytochrome P450 3 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS E-class P450 group I signature 185 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS E-class P450 group I signature 363 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS E-class P450 group I signature 205 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS E-class P450 group I signature 353 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 CDD CYP86A 1 408 - -
Viun10g02352 416 Gene3D Cytochrome P450 1 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS P450 superfamily signature 196 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS P450 superfamily signature 354 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02352 416 PANTHER CYTOCHROME P450 2 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02352 Viun-Chr10 37926675 37929137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02352 1 415 Cytochrome P450 AT1G69500 75.000 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02352 K20495 - gmx:100787802 753.051