Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02322 ATGGAGAATCGGAAGACTTCGGCGTATTACGAGAACAGAGCGGTGCAGTTCGGGGTAGTGAGCACCGAGTGGCTCGCTCAGGCTCAGTCCGCCACAGTCCACCGTTCCCCTTCTCCTCCTCCGCCTCTTCCTCCTCCCCACAATGACGCCGACAAACCCTTCTCCGTCATCCAGGAGTTCGACAGCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATCCGCTCCAGCAAGGCTACCACCATGATGCAGCTCGAAATCCAACTCAAAAGCGCCTCCGATTCCCTCAAATGTTGGGATACAACCTCGATCTCCTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGGACTTCCGCTCTCGAGTACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAATCATTGCAATGCTGAGCCAGGATTTTGTATTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTACTTCAGATTCTCAAACTCGCCGCACAGAATAACAAGCTCTTTAGAGTCTTGTGCACAGAGGGGAGACCGGATAGAACGGGTTTGCGGTTGTCCAATGAGCTGGCGAAGCTTGATGTGCCTGTGAAGCTTGTTATAGACTCTGCAGTGGCTTATACTATGGATGAGGTTGACATGGTCTTTGTTGGGGCAGATGGCGTTGTTGAAAGTGGTGGTATAATTAACATGATGGGGACTTACCAAATTGCAATGGTGGCTAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGATTTTACCCTCTGGATCAAAAAGATTTGGCCCCTGCCTTACGCCCTGTTGATTTTGGTGTGCCTGTTCCATCCAAGGTTGAGGTTGAATGTTCTGCGCGGGATTATACTCCTCCTCAGTATCTCACTCTACTTTTCACTGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATACCTGTAG 1062 0.5132 MENRKTSAYYENRAVQFGVVSTEWLAQAQSATVHRSPSPPPPLPPPHNDADKPFSVIQEFDSWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIQLKSASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKAREIIAMLSQDFVFDGCTILVHGFSRVVLQILKLAAQNNKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPVPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02322 353 FunFam Translation initiation factor eIF-2B subunit alpha 157 353 - -
Viun10g02322 353 Pfam Initiation factor 2 subunit family 67 341 IPR000649 GO:0044237
Viun10g02322 353 MobiDBLite consensus disorder prediction 35 49 - -
Viun10g02322 353 SUPERFAMILY NagB/RpiA/CoA transferase-like 67 352 IPR037171 -
Viun10g02322 353 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 353 - -
Viun10g02322 353 Gene3D - 157 353 IPR042529 -
Viun10g02322 353 FunFam Translation initiation factor eIF-2B subunit alpha 52 154 - -
Viun10g02322 353 MobiDBLite consensus disorder prediction 29 51 - -
Viun10g02322 353 Gene3D - 52 154 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02322 Viun-Chr10 37722440 37725462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02322 7 353 Eukaryotic Initiation Factors Gene Family AT1G53880 80.692 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02322 K03239 - gmx:102669842 618.231