Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02296 ATGGCTTCCTCCTGTGCTTCCTCTGCCATTGCAGCTGTTGCAATCTCCACCCCAAGTTCAAAAAATGGATCACTGTTGGGAACCGCAAAAGCTTCTTTTCTCAGTGGAAGGAAACTGAAGATGAACAGTTTCACAGCACCGGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGACCCTGATAGGCCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCTGGAGATTTTGGTTTTGATCCTCTCGGTCTTGGATCTGATCCTGAGAGCTTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGTGCTGCTGGAATTTTCATCCCAGAATTCCTCACAAAGATTGGTATCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACCACCACACTGTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGATGGGCTGACATCATCAAACCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTGGGCTGGGGAAGTGGCTCTCCCGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCAGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 810 0.5012 MASSCASSAIAAVAISTPSSKNGSLLGTAKASFLSGRKLKMNSFTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02296 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Viun10g02296 269 SUPERFAMILY Chlorophyll a-b binding protein 59 267 - -
Viun10g02296 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 267 IPR001344 GO:0009765|GO:0016020
Viun10g02296 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Viun10g02296 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02296 Viun-Chr10 37519142 37521128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02296 45 269 Chloroplast and Mitochondria Gene Families AT3G61470 88.938 1.46e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02296 K08908 - gmx:100784089 538.88