Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02292 ATGGAGAACATAGTTTCCATACTTGATCACGTGCCTGTGGGATTCAGGTTCCGTCCCACAGATGAGGAACTTGTCAACTATTACCTCAAACACAAGTTGCTCGGTGATGATTTCTCTGTTCAGGTCATTCCAGAGATCGACCTTTGCAGAGTGGAACCTTGGGACGTGCCAGCAAAATCAGTGATAAAATCCGATGACCCAGAATGGTTTTTCTTCAGTTCTGTGGATTACAAGTACTCCAATAGTAAAAGGGTCAATAGGACCACCGAACATGGTTTCTGGAAAGCCACTGGAAATGACCGTAAAATTAGGATTGGTGGCACTAACAATGTCATTGGGACAAAGAAGACTCTTGTTTTTCACGAAGGCCGTGTTCCTCGTGGTGCCAAAACCAACTGGGTTATTCATGAATATCATGCTCTTACCTCCCATGAAAGCCAGAAGACTTTCGTTTTATGCCGCTTGATGAAGAAATTTGAGAAAAAAAATGAAGGGGGAATTGAGGCACCAAACCTTCCTGACTATGGAAATCCGGTACCAGCTGAAGAAATTCCATCTGTAGTAAATGTTTCACCTAGAGTGATTGTGGATCCAATCTCTTCGGATGATATTTTCTTCCCCCCAGTAGAACAATCTGCAGTTGGTATTGAACTGGAAGAAATTTTCCGAAACCCCTCATTGCTCGATGCTTGTTTTGGAAATGAAAGCTCCAATGCGGCGCAAATTCCATTTCGAGATACTGATGATGAAGATGACTTCGTAAATTCAATATGGGTCGATGATGAAGAGCTTGTGATCAATGAAGAAAGAAGACACTGTTTTGTCAATTCTTCCACCCAACCAAAGTCATTGAGAAGGGTATACAATGCAAGCACTGGCACAGATGCTGAACTTGTCTCTAATCTGCATGCCAACATTTGTTCTGGTGAATACTCTGGCATGAGTAGTATAGATTCTAATCATGAAGCACACAAAGAAAAAAAGGAGAGTATCATTCAAGATGATTTCTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCTATTGAAATTTCTAGTTCTTCCTCCACTCGAACAAGATTGGAAAATCGGTGTAATCCAAGACCAGACAACTTCATATTACAAAAAACTGTTGCAGGAAGACCACAAACACAAAAGAAGGTTTCAAACAATGCAGTATCCCATGTTGAGACTAGGAGGGAATTGGTGACTGTGAAATCAGAGAAAGATGAGAAAAAGGCTCAAAATTCTAGTTCAAGAGAGATCCTCAAAATCAGAAGCCATCAATCCTCTGATGTCAATAGCAAAGGTTCTTTCTTTCACATGGAAACGACTTCATCAAACCAAAACCTATTTCCACGTTCTGTATATCTTGTCAATGTTGTCATAGGGATTGTGTTGTTAATAGTCATTAGTTGTGATGTATTATTATGTTAG 1446 0.4059 MENIVSILDHVPVGFRFRPTDEELVNYYLKHKLLGDDFSVQVIPEIDLCRVEPWDVPAKSVIKSDDPEWFFFSSVDYKYSNSKRVNRTTEHGFWKATGNDRKIRIGGTNNVIGTKKTLVFHEGRVPRGAKTNWVIHEYHALTSHESQKTFVLCRLMKKFEKKNEGGIEAPNLPDYGNPVPAEEIPSVVNVSPRVIVDPISSDDIFFPPVEQSAVGIELEEIFRNPSLLDACFGNESSNAAQIPFRDTDDEDDFVNSIWVDDEELVINEERRHCFVNSSTQPKSLRRVYNASTGTDAELVSNLHANICSGEYSGMSSIDSNHEAHKEKKESIIQDDFWAVETSSCDSTADEPIEISSSSSTRTRLENRCNPRPDNFILQKTVAGRPQTQKKVSNNAVSHVETRRELVTVKSEKDEKKAQNSSSREILKIRSHQSSDVNSKGSFFHMETTSSNQNLFPRSVYLVNVVIGIVLLIVISCDVLLC 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02292 481 MobiDBLite consensus disorder prediction 348 365 - -
Viun10g02292 481 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Viun10g02292 481 MobiDBLite consensus disorder prediction 408 437 - -
Viun10g02292 481 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Viun10g02292 481 MobiDBLite consensus disorder prediction 348 370 - -
Viun10g02292 481 MobiDBLite consensus disorder prediction 423 437 - -
Viun10g02292 481 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Viun10g02292 481 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Viun10g02292 481 MobiDBLite consensus disorder prediction 408 422 - -
Viun10g02292 481 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02292 Viun-Chr10 37493130 37496408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02292 8 160 NAC Transcription Factor Family AT3G49530 55.063 6.29e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02292 NAM 8.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02292 - - gsj:114390609 640.573