Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02289 ATGGATGATGTTGTAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAGACATAGGTTGCTCGGTGATGATCCTCAAGTCCACGTCATCCCCGACATTGACCTTTGTCAAGTGGAACCTTGGGACGTGCCAATGTTAGTCTTTAGTCCCGTTGATTTCAAGTATTCAAACAGTAAAAGGATTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACCGGAAAAGATCGTGAGATTAGAAGCTCCGACTCCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTTCAAAGGTCGCGTTTCACGTGGTCAGAAATCCAACTGGGTTATTCACGAATACCATGCTGTCACCTTTCACGAAAGCCAGAGGACTTTTGTTTTGTGTCGTCTGATGAAGAAACCTGGGGGAACAACTGAAGGTGGGGGTGATGAAGGGGAGAGCAGTAGAATCATGGTTTCTGGCTATCACAATCCCTCCATAGGAACCACCTTTCAGCAAGACCAAGCGTCTTTTCCAAACCCCTCATTTGACGATGCCCATTTTAGAAATGAATCTAACATTGAGCACAATTCATATGAAAATACCCAGGAAGAGGAATTCGTGAATTCTTTTTTTGTTGAGGACAATTATGTTAACAATGAAGAAAGTACAAATACCTACTTCAATACTTTCACCCAATCGGAGTCATTGAGAAAGGTATATGATACAGATGTTGAGGCCGTCTCTCAACAGGGTGATAATACTATGAATATTTCCACAGTGTGTAGTAAATATCCCAACTCAGACGAATACCATTCATCAAAAGAGTTTGATTCCGAATTATCAAACGTTGATGTCCATGAAGGTGTATGTATGTCATCTCCTATCCATGAAAAAAAACAAGAGAAAAAGAAGAAAAAGAAGAGCAAGTTTTCTTTCTTCTGA 942 0.413 MDDVVGFGFRPTEEELVDYYLRHRLLGDDPQVHVIPDIDLCQVEPWDVPMLVFSPVDFKYSNSKRINRTTKCGFWKPTGKDREIRSSDSNTLIATKKTLVYFKGRVSRGQKSNWVIHEYHAVTFHESQRTFVLCRLMKKPGGTTEGGGDEGESSRIMVSGYHNPSIGTTFQQDQASFPNPSFDDAHFRNESNIEHNSYENTQEEEFVNSFFVEDNYVNNEESTNTYFNTFTQSESLRKVYDTDVEAVSQQGDNTMNISTVCSKYPNSDEYHSSKEFDSELSNVDVHEGVCMSSPIHEKKQEKKKKKKSKFSFF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02289 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 205 - -
Viun10g02289 313 MobiDBLite consensus disorder prediction 299 313 - -
Viun10g02289 313 Pfam No apical meristem (NAM) protein 5 120 IPR003441 GO:0003677|GO:0006355
Viun10g02289 313 SUPERFAMILY NAC domain 5 139 IPR036093 GO:0003677|GO:0006355
Viun10g02289 313 MobiDBLite consensus disorder prediction 291 313 - -
Viun10g02289 313 ProSiteProfiles NAC domain profile. 3 139 IPR003441 GO:0003677|GO:0006355
Viun10g02289 313 Gene3D NAC domain 12 142 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02289 Viun-Chr10 37485056 37487114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02289 5 140 NAC Transcription Factor Family AT4G35580 47.368 2.32e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02289 NAM 1.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02289 - - vra:106753224 489.96