Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02287 ATGTTTCATTCAAACTACAAACACAGAGTTCAGTGTTCACCAAAATCAATGGGTAAAATTGTTGGTGTCGGTTTCCGTCCTACAGAACAAGAACTCGTCGATTTCTACCTCAAACACAAGTTGCTGGCTGATGATTCCCGTGTCGACGTTATCCCTGTCATTGACCTCTGCCATGTGGAACCTTCGGATGTACCAGGGATACTTGCAAAATCACGGATTCGATTTGGTGACCCAGACTGGTTTTTCTTCAGTCCGGTTGATTTCAAGTATTCAAACAGTAAAAGGGTTAACAGGAAAACCGAGAAAGGGTTCTGGAAAGCCACTGGAAAAGACCGTGATATTAGGAGCTGGAACACCAACACTCTGATTGCCACAAAGAAGAATCTTGTTTACTACAAAGGAAGTGTTTCCTGTGGTGTCAAGTCCTACTGGGTTATTCACGAATATCACGCTGTTACCTTTGATGAAAGCGAGAATGCTTTTGTGTTATGCCGCTTGATAAAGAAACCTGAGAAAAAAACTGAAGGAGGAACTGCTGCACTGATATGTGATGAAGGGGAATCCAGTAGAAGCGTGGTTTCTGACTATGAAAATCAGGCGATAGCAGAAGGAGTTCCATCCGGAGGTACTCTAACCGGAATGGAAACAATCTGTCAGGTAACATATCAGGCAGAAAAATGCATCTCCCCTACAGAACCGTCACTAATTGAAATTGAGCAGGATGACGATGCCTATTTTAGAAATGAAAACAACAATGGGCGGAGTCCTTCTGAAATTATGCAGATTCCTTACGAAACTATGCACACTCCTTGTGAAACTATACACACTCCTTATGAAATTATGCAGATTCCTTGTGAAACTATGCAGACTCTTTATGAAACTTTGCAGATTCCTTGTGAAACTATGCAAAGTTCTTGTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTTCTTTTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTTCTTTTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTCCTTTTGAAAGTATGCATACTCCTTGTGAACCTGTACAGACTCCTTGTGAAACTATGCAGATTTCTTGTGAAAGTATGCAGAATCCTTGTGAACCTGTGCAGATTTCTTGTGAAACTATGCAGATTTCTCATGAAACCAACCAAATTCCTTTTGAAATTTTGCAGTTTCCTTTAGAAACTATGCAGACTCCTTCTCAAACTACACAAATTCCTTTTGAAACTATAGAAGTTCCTTTTCAAACTACGCAAACTCCATTAGAAACTACACAAATTCTACCTAAACTCCCGAATTCATTATTAGCCGATGAATATTTAGTCAATCAATCAAAGTCACTGAAAAGGGCATATTGCGAAAGCTCTTATAGAGATGCAGAAGTCGTCCCTGAACTGGACACTAGTTTTGAGGATATTTCAACTTTGTATACTGAGTATCTTAACTCAGAGGAATATCATGCATTAAAAAGGTTTAAAACATCATATGATGTTGGACATGGTGACACACATCTTCTATTTTCCAGCCAAGAAGCAAGTGAAGAGAAACAAGAAAGTATATTTCAAGATGACTTATGGGGATGGGAGACATCCTCATGTGACTCTACAACAAATAAACTTGTGGAGATCAATTACAGTGAAATATCTAGCTTTCCTTGCACTTAA 1695 0.3935 MFHSNYKHRVQCSPKSMGKIVGVGFRPTEQELVDFYLKHKLLADDSRVDVIPVIDLCHVEPSDVPGILAKSRIRFGDPDWFFFSPVDFKYSNSKRVNRKTEKGFWKATGKDRDIRSWNTNTLIATKKNLVYYKGSVSCGVKSYWVIHEYHAVTFDESENAFVLCRLIKKPEKKTEGGTAALICDEGESSRSVVSDYENQAIAEGVPSGGTLTGMETICQVTYQAEKCISPTEPSLIEIEQDDDAYFRNENNNGRSPSEIMQIPYETMHTPCETIHTPYEIMQIPCETMQTLYETLQIPCETMQSSCESMQTPCETMQTSFESMQTPCETMQTSFESMQTPCETMQTPFESMHTPCEPVQTPCETMQISCESMQNPCEPVQISCETMQISHETNQIPFEILQFPLETMQTPSQTTQIPFETIEVPFQTTQTPLETTQILPKLPNSLLADEYLVNQSKSLKRAYCESSYRDAEVVPELDTSFEDISTLYTEYLNSEEYHALKRFKTSYDVGHGDTHLLFSSQEASEEKQESIFQDDLWGWETSSCDSTTNKLVEINYSEISSFPCT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02287 564 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Viun10g02287 564 SUPERFAMILY NAC domain 13 169 IPR036093 GO:0003677|GO:0006355
Viun10g02287 564 Gene3D NAC domain 28 174 IPR036093 GO:0003677|GO:0006355
Viun10g02287 564 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 309 - -
Viun10g02287 564 Pfam No apical meristem (NAM) protein 21 150 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02287 Viun-Chr10 37477738 37492219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02287 21 176 NAC Transcription Factor Family AT4G35580 45.963 1.03e-39 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02287 NAM 7.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02287 - - vun:114167348 1164.83