Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02286 ATGGATGATGTTGTAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAGACATAGGTTGCTCGGTGATGATCCACAAGTCCACGTCATCCCCGACATTGACCTTTGTCAAGGGGAACCTTGGGACGTGCCAATGTTATTCGGGGAATCAAATGTACAATTTGATTTCCCAGAATGGTTTTTCTTTAGTCCCGTTGATTTCAAGTATTCAAATAGTAAAAGGATTAACCGGACAACCAAGTGTGGCTTCTGGAAACCCACCGGAAAAGATCGTGAGATTAGAAGCTCCGACTCCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTACAAAGGTCGCGTTTCACGTGGTCAGAAATCCAACTGGGTTATTCACGAATACCATGCTGTCACCTTTCACCAAAGCCAGAGGACTTTTGTTTTGTGTCGTCTGATGAAGAAACCTGGGGGAACAACTGAAGGTGGGGGTGATGAAGGGGAGAGCAGTAGAATCATGGTTTCTGGCTATCACAATCACTCAATAGGAACCACCTTTCAGCAAGACCAAACGTCTTTTCCAAACCCCTCATTTTACGATGCCCATTTTAGAAATGAATCTAACATTAAGCACAATTCATATGACGATACCCAGGAAGAGGAATTCGTGAATTCTTTTTTTGTTCAGGACAATTATGTTAACAATGAACAAGGTACAAATACCTACTTCAATACTTTCACCCAATCGGAGTCATTGAGAAAGGTATACGATACAGATGCTGAGGCCGTCTCTGAACAGGGTGATAATATTATGGATATTCCAACAGTGTTTACTAGATATCTTAACTTAGACGAATACCATTCATCAAAAGGGTTTGATTCTGAATTATCAAACGTTGATGTCCATGACGGTGCTGGGAAGGATTTTCTGTTTGTGAATCAGAAGAAAAATAGTTGA 951 0.4143 MDDVVGFGFRPTEEELVDYYLRHRLLGDDPQVHVIPDIDLCQGEPWDVPMLFGESNVQFDFPEWFFFSPVDFKYSNSKRINRTTKCGFWKPTGKDREIRSSDSNTLIATKKTLVYYKGRVSRGQKSNWVIHEYHAVTFHQSQRTFVLCRLMKKPGGTTEGGGDEGESSRIMVSGYHNHSIGTTFQQDQTSFPNPSFYDAHFRNESNIKHNSYDDTQEEEFVNSFFVQDNYVNNEQGTNTYFNTFTQSESLRKVYDTDAEAVSEQGDNIMDIPTVFTRYLNLDEYHSSKGFDSELSNVDVHDGAGKDFLFVNQKKNS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02286 316 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 208 - -
Viun10g02286 316 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Viun10g02286 316 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Viun10g02286 316 Gene3D NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
Viun10g02286 316 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02286 Viun-Chr10 37473460 37475034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02286 5 154 NAC Transcription Factor Family AT4G35580 51.613 1.11e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02286 NAM 1.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02286 - - vra:106753224 525.783