Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02285 ATGGGTAAAATTGTTGGTGTCGGTTTCCGTCCTACAGAACAAGAACTCGTCGATTTCTACCTCAAACACAAGTTGCTGGGTGATGATTCCCGTGTCGACGTTATCCCTGTCATTGACCTCTGCCATGTGGAACCTTCGGATGTACCAGGGATACTTGCAAAATCACGGATTCGATTCGGTGACCCAGATTGGTTTTTCTTCAGTCCGGTTGATTTCAAGTATTCAAACAGTAAAAGGGTTAACAGGAAAACCGAGAAAGGGTTCTGGAAAGCCACTGGAAAAGACCGTGATATTAGCAGCTGGAACACCAACACTCTCATTGCCACAAAGAAGAATCTTGTTTACTACACAGGAATTGTTTCCTGTGGTGTCAAGTCCTACTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAAAGCGAGAGGTGTTTTGTTTTATGCCGCTTGATGAGAAAATCTGGGAAAACAACTGAAGGGGGAACCGATCCACCAATCTGTGGTGAAGAGGAGCCCAGCATAATCAAGGGAGGTACTTTTTCAGGAGTGGAAACAATCTTTCTGGCTGATCCTCAGACAGAGACATACGTCTCCCAAATACAACCGTCTCCACGAGAAGAAGCATCTTTTCCAAATTATCCACTAAACAATGTCTGTTTTGGAAATGAAAAGAGCTTTATGCAAGATGAATACCTGAATCGAATTTTAGCCGATGAAAACTTAGATAATGATGAAGAAAGTAGTTGTACTTTTGTTGATAATTTTTCTCAAAAGGACACAAATATCGTGGATAGTTCATTTGTTCACGATAAATATTTCAATTATGACGAATACCATTCATCAAAAAGGTTGAAATTATCAAAAGATGTTGCTGATGATGCATCAACAAATCAAGAAACAAAAGAAAGTATGATTGGAGATGGATTTTGGAGAATGGAATCATCCTCTTGTGATTCAACTCCAAATGGAGTTTTGGAGATTAATTGCACTGAAGTTTCTAGTTCTCGGTCCATTTCATGA 1020 0.399 MGKIVGVGFRPTEQELVDFYLKHKLLGDDSRVDVIPVIDLCHVEPSDVPGILAKSRIRFGDPDWFFFSPVDFKYSNSKRVNRKTEKGFWKATGKDRDISSWNTNTLIATKKNLVYYTGIVSCGVKSYWVIHEYHAVTFHESERCFVLCRLMRKSGKTTEGGTDPPICGEEEPSIIKGGTFSGVETIFLADPQTETYVSQIQPSPREEASFPNYPLNNVCFGNEKSFMQDEYLNRILADENLDNDEESSCTFVDNFSQKDTNIVDSSFVHDKYFNYDEYHSSKRLKLSKDVADDASTNQETKESMIGDGFWRMESSSCDSTPNGVLEINCTEVSSSRSIS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02285 339 Gene3D NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
Viun10g02285 339 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Viun10g02285 339 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Viun10g02285 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 214 - -
Viun10g02285 339 SUPERFAMILY NAC domain 4 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02285 Viun-Chr10 37469895 37471753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02285 5 153 NAC Transcription Factor Family AT4G35580 46.753 2.23e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02285 NAM 4.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02285 - - var:108346924 502.286