Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02281 ATGGATGATGTTGTAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAGACATAGGTTGCTCGGTGATGATCCTCAAGTCCACGACGTCATCCCCGACATTGACCTTTGTCAAGTGGAACCTTGGGACGTGCCAATGTTATTGGGGGAATCAGATGCACAATTCGATTTCCCAGAATGGTTTTTCTTTAGTCCTGTTGATTTCAAGTATTCAAACAGTAAAAGAATTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACCGGAAAAGATCGTGAGATTAGAAGCTCCGACTCCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTACAAAGGTCGCGTTTCACGTGGTCAGAAATCCAACTGGGTTATTCACGAATACCATGCTGTCACCTTTCACCAAAGCCAGAGGACTTTTGTTTTGTGTCGTCTGATGAAGAAACCTGGGGGAACAACTGAAGGTGGGGTGATGAAGGGGAGAGCAGTAGAATCATGGTTCTGGCTATCACAATCACTCAATAGGAACCACCTTTCAGCAAGACCAAACGTCTTTTCCAAACCCCTCATTTGA 591 0.4501 MDDVVGFGFRPTEEELVDYYLRHRLLGDDPQVHDVIPDIDLCQVEPWDVPMLLGESDAQFDFPEWFFFSPVDFKYSNSKRINRTTKCGFWKPTGKDREIRSSDSNTLIATKKTLVYYKGRVSRGQKSNWVIHEYHAVTFHQSQRTFVLCRLMKKPGGTTEGGVMKGRAVESWFWLSQSLNRNHLSARPNVFSKPLI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02281 196 SUPERFAMILY NAC domain 5 154 IPR036093 GO:0003677|GO:0006355
Viun10g02281 196 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Viun10g02281 196 ProSiteProfiles NAC domain profile. 3 154 IPR003441 GO:0003677|GO:0006355
Viun10g02281 196 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 157 - -
Viun10g02281 196 Gene3D NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02281 Viun-Chr10 37446838 37447765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02281 5 161 NAC Transcription Factor Family AT4G35580 50.000 7.57e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g02281 NAM 3.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02281 - - vun:114165637 416.387