Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02268 ATGATAACCATGGAACCTAGAGTGATAGGGGATTACATAATGGGTCCTCCAATCGGGTCGGGTTCCTTTGCGGTGGTATGGCGTTCAAGGCACCGAGTTTCCGGTTTGGAAGTTGCGATTAAGGAGATTGACCAGAGACAACTCAGTCCTAAAGTCAAGGAACATCTCCTCAAAGAGATTTCTATCCTCAGCACCATCAAGCACCCCAACATCGTTAGACTCTTTGAGACAATTCAGGCCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCAGCGCCATGGCAAGGTTTCTGAAACGGTTGCACGCCATTTCATGAGGCAATTGGCTGCTGGGTTACAGGTGCTTCAGGAAAAGAACCTCATTCACAGAGATTTAAAACCCCCGAATTTACTACTGGCATCTACTGCAGCCACACCAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGAGTTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATTATTGAGAATCAAAAGTACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATTTTGTATCAACTAGTGATTGGGAAGCCACCATTTGATGGAAATAGTCAATATCAGCTTTTCCAAAATATTTTGGCATCCACTGAACTGTACTTTCCGCCAGAGGCATTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTTTTACGACAAAATCCAGATGAGAGATTAACTTTCAAGGCATTCTTCAACCACAATTTCCTTCAGAATTCCAGTGATTTCTTGTCATTCATAACTTACAGGTCTACCTTAGGAAAATTGACAGTTCATCAATCAGGTGGCTCTCTGTCCGAGATGTCTCCAGCTATTGCAAGTGGTAAGATGGGAAAGGCTGTTCATGCTGATTCCCGTTTAATGCAATCTGTAGAGAAAGACTATGTCCTTGTGAATTCCCATTTTGCATCACTGGAGGCTTTTTCTGACTACTTTGATGCATCTGTGCAAGATGATTCCTTATACGGTCTTTCTCTTACTGATTCAAAGATTGCTAATCCGGATATTGGAGTTCCAAAACAAACAACGAATCTGACATCTTCCTCCAGTAGAGGATTAGAGAATCTAGAAAGCAATAAACTTGAGGCATGTGTGGCATCATGTGAATTTACTGCTTTAAGGGAAGAGCATGAAAATTCCTCACTGCAACCTTCAAAGAGGTTAGAGTTGTTGCATGAGTATGTCAAGATCCTTAAAGAACTTTCGCAACAAAAGTATGATACAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGATTCTAGCGATATGGAAGAAGGCTCTAGAAATTTGTAACTCTTGTGAGTTGCCTGAAAGCAGTTCAACTAACGAATCCATATCTTCAAGTAATGTGGAGTTACCACAGACTTCCGAACTGAAAATAAATTTTAGTGATCCTCCATCTGTCTCCATGTGGGCCAAACATGAGTTTGTTCTTGCTGTTGATCGTGCTGAAAAACTATCGTGTTGTGTTCAAAATATGGATGGAGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAGAACGCTCTCTCAATCGGGACAAGTGGTGCGGTAGATGAATATATGGAGAACAGAGATAGGGCTAATGCATCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCGACTAATAAAGAGAGAATATTACAATACATTCACACATTACAGTCTCGTAAGAAATCTTCGTTGGAATCCTCTTCAAATAAGCCACTTTCACGTACATCAAAGTAG 1890 0.4153 MITMEPRVIGDYIMGPPIGSGSFAVVWRSRHRVSGLEVAIKEIDQRQLSPKVKEHLLKEISILSTIKHPNIVRLFETIQANDRIYLVLEYCAGGDLAAYIQRHGKVSETVARHFMRQLAAGLQVLQEKNLIHRDLKPPNLLLASTAATPIMKIGDFGFARSLTPQSLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGKPPFDGNSQYQLFQNILASTELYFPPEALKELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQNSSDFLSFITYRSTLGKLTVHQSGGSLSEMSPAIASGKMGKAVHADSRLMQSVEKDYVLVNSHFASLEAFSDYFDASVQDDSLYGLSLTDSKIANPDIGVPKQTTNLTSSSSRGLENLESNKLEACVASCEFTALREEHENSSLQPSKRLELLHEYVKILKELSQQKYDTGLYLESLAVELVILAIWKKALEICNSCELPESSSTNESISSSNVELPQTSELKINFSDPPSVSMWAKHEFVLAVDRAEKLSCCVQNMDGAAEMPDAMEIIFQNALSIGTSGAVDEYMENRDRANASYSRAMLLLSFLVREAENLPLNPPFSLIATNKERILQYIHTLQSRKKSSLESSSNKPLSRTSK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02268 629 FunFam Maternal embryonic leucine zipper kinase 6 302 - -
Viun10g02268 629 CDD STKc_ATG1_ULK_like 18 269 - -
Viun10g02268 629 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02268 629 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02268 629 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Viun10g02268 629 SUPERFAMILY Protein kinase-like (PK-like) 8 292 IPR011009 -
Viun10g02268 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Viun10g02268 629 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02268 629 FunFam Aurora kinase A 5 94 - -
Viun10g02268 629 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 545 IPR045269 GO:0004674|GO:0006914
Viun10g02268 629 Gene3D Transferase(Phosphotransferase) domain 1 4 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02268 Viun-Chr10 37358445 37363034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02268 7 271 CBL-interacting serine-threonine protein kinases AT2G26980 35.926 3.05e-47 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Viun10g02268 Pkinase 2.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02268 - K08269 gmx:100782508 905.975