Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02253 ATGGAAGAAGAACAAAGCTTCACTTACGCCATGCAGCTGGTGAACACTAGTGTGCTATCCATGGCCATGTACACGGTCACAGAGCTTGGCATTTTTGACATCATAGCCAAAGAAGGTGTGGGTGCCAAACTATCTGCAAAAGACATTGCAGAAAAGCTTCCATGCAAGAACTCAGAAGCAGCCACAATGCTCGATCGTATTCTGAGGCTCCTTGCATGTCACTCTGTCATTCACTGCACCGTGGTTGCCGATGAACATGGTTCTCATCCGCAACTGAAGAGGCTCTATGGCATGAACCCTGTGGCCAAATACTTTACTTCCATTCATGGTGCTGGCTCTTTAGGCCCTTTCATGAGACTGTCTCATGACAAGGCCTCGCTTCGCAGCTGGTACCAACTAAAAGATGCAATTCTGGAAGGAGGAATTCCATTCAACAGGGCCCATGGCAAACACTTGTTTGAATATTCTGATATGAACTCAAGCTTCAACAATCTTTTTACAGCGACAATGAACAACCGTGCAACTTTAATAATGAATAAGATTGTGGAATCCTACAAAGGGTTTGAGAAGATGAATAAGTTGGTTGATGTTGGAGGTGGCCATGGAGTCTCTCTTAACATAATAACTTCAAAATACCCTCACATTAAGGGCGTCAACTTTGACCTGCCTCATGTCATCCAACATGCCTCTCCCTATCCTGGAGTGGAGCATGTGGAAGGAGATATGTTTGAAAGTGTGCCGAAAGGAGATGACATTTTTATGATGTGTGTGCTTCATGATTGGAGCGATGAAATGTGCTTGAAGGTGTTGAGGAACTGCTATGATGCAATTGGTAGTGATGGAAAGGTGATTGTGGTGGACGGAGTTCATCCATTTGAACCAAAGACAACATGTGCAGCAAAGAACATGTCCCAATTTGATGTGCTGATGATGACTACAAACCCAGGTGGGAAGGAACGAAGTGAAGAGGAATTCATGGCATTGGCAAAAGGAGCTGGATTCAGAGGAATTAGATACACATGCTCTGTCTGTGACTTATGGGTTATGGAGTTTTTCAAGTAG 1062 0.4426 MEEEQSFTYAMQLVNTSVLSMAMYTVTELGIFDIIAKEGVGAKLSAKDIAEKLPCKNSEAATMLDRILRLLACHSVIHCTVVADEHGSHPQLKRLYGMNPVAKYFTSIHGAGSLGPFMRLSHDKASLRSWYQLKDAILEGGIPFNRAHGKHLFEYSDMNSSFNNLFTATMNNRATLIMNKIVESYKGFEKMNKLVDVGGGHGVSLNIITSKYPHIKGVNFDLPHVIQHASPYPGVEHVEGDMFESVPKGDDIFMMCVLHDWSDEMCLKVLRNCYDAIGSDGKVIVVDGVHPFEPKTTCAAKNMSQFDVLMMTTNPGGKERSEEEFMALAKGAGFRGIRYTCSVCDLWVMEFFK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02253 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Viun10g02253 353 Gene3D Vaccinia Virus protein VP39 109 353 IPR029063 -
Viun10g02253 353 FunFam Caffeic acid O-methyltransferase 106 353 - -
Viun10g02253 353 SUPERFAMILY "Winged helix" DNA-binding domain 2 106 IPR036390 -
Viun10g02253 353 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Viun10g02253 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 353 IPR016461 GO:0008168
Viun10g02253 353 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Viun10g02253 353 Gene3D - 1 105 IPR036388 -
Viun10g02253 353 Pfam Dimerisation domain 21 72 IPR012967 GO:0046983
Viun10g02253 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 350 IPR029063 -
Viun10g02253 353 PANTHER O-METHYLTRANSFERASE 10 338 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02253 Viun-Chr10 37270614 37272046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02253 3 353 Monolignol Biosynthesis Gene Families AT5G54160 48.433 3.62e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02253 K13066 - gmx:100788873 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02253 10 37270614 37272046 Viun10g02253 10 37270614 37272046 ECH