Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02252 ATGGCTCCATCAGAGGAAACCAATATCGTTGAAGCCATGCAACTCAAGCACGTGGAAGAAGAGCAAGATGGTCTCTTCTTTGCCCTGAACATGGTGTCTAGTGCGACGTTCCCTCTTGCGGTTAAGACAGCGAATGAGCTTGGTATCTTTGACATCATGGCCAAAGAAGGTGAAGGTGCAAAGCTCTCAGCACAAGATATTACAGAAAAACTTGGCATAAAGAACCCACAAGCACCAACTATGTTGGATCGGATTCTGAGGCTGTTGGCCAGTCACTCCATGCTATCTTCGTGTCTTGGTGAAGAAGGCCAAAATTCTGGGAAGAGACTCTATAGCCTCACCTATGCTTCCAAGTACTTTGTTTCTGATGCTGATGGTGTTTCATTTGGAGCTTCCTTGAACTTGATTCTTGGCAAGGTCTGCTTGGATAGCTGGACTGAACTGAAAGGAGCCATCGCGGAAGGTGGCATAGCATTCAACAGGGTTCATGGGATGAATGCATTTGAGTATTCAGCGGTGGATCCTACGTACAATGATGTTTTCAACAAAGCCATGTTCAACATTACCACCATAATCACAAATAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAACAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAAACTAATCACTTCAAAATATCCCAATCTTCAAGGTGTTAACTTTGACTTGCCACACGTCATAGAACATGCCCCTACCTACCCTGGTGTGGAACATGTAGCAGGAGATATGTTTGAGAGTGTTCCTAATGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGGGTGATGAAGAGTGTGTGAAGTTGCTGAAGAACTGCTACAAAGCTATTCCCAGTGATGGAAAAGTGATTGTTGTGGATTTGATTGTTCCTGCTTTGCCTGAAAGTACAGTTATTGCGAGGAATGGTTACCAAGCTGACATATTGATGATGGCTCAAAACCCAGGAGGGAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTATCTTCTGGTTTCAGTGGCATCACATTCGTCTGTTTTGTCTCTGGCTTCTGGGTTATGGAGTTTTACAAGTAG 1107 0.4417 MAPSEETNIVEAMQLKHVEEEQDGLFFALNMVSSATFPLAVKTANELGIFDIMAKEGEGAKLSAQDITEKLGIKNPQAPTMLDRILRLLASHSMLSSCLGEEGQNSGKRLYSLTYASKYFVSDADGVSFGASLNLILGKVCLDSWTELKGAIAEGGIAFNRVHGMNAFEYSAVDPTYNDVFNKAMFNITTIITNRVLELYDGFKNINRLVDVGGGLGINLKLITSKYPNLQGVNFDLPHVIEHAPTYPGVEHVAGDMFESVPNGDAIFMKWILHDWGDEECVKLLKNCYKAIPSDGKVIVVDLIVPALPESTVIARNGYQADILMMAQNPGGKERTQNEFMELALSSGFSGITFVCFVSGFWVMEFYK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02252 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 368 IPR016461 GO:0008168
Viun10g02252 368 FunFam Caffeic acid 3-O-methyltransferase 6 120 - -
Viun10g02252 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Viun10g02252 368 Gene3D - 7 120 IPR036388 -
Viun10g02252 368 SUPERFAMILY "Winged helix" DNA-binding domain 20 123 IPR036390 -
Viun10g02252 368 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Viun10g02252 368 CDD AdoMet_MTases 208 305 - -
Viun10g02252 368 PANTHER O-METHYLTRANSFERASE 29 366 IPR016461 GO:0008168
Viun10g02252 368 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Viun10g02252 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 367 IPR029063 -
Viun10g02252 368 FunFam Caffeic acid O-methyltransferase 121 368 - -
Viun10g02252 368 PIRSF O-mtase 6 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02252 Viun-Chr10 37263494 37266017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02252 14 368 Monolignol Biosynthesis Gene Families AT5G54160 50.843 3.03e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02252 K13066 - var:108346436 619.772