Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02248 ATGGAAGCGCAAAGCTCTCAGCAAACGCAAGTTATTGAGATCAGTGGAGATCTTCCTGATGGCGCAAGAAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGATGCCGGATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCTGCCTTTGCCATCTCCTTATTTTCTTTGTGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAAATTCTTGGTGCCTTGGTTTCTATCCAATTAATATGGCTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGTCCTCAAAGCGTGGATGGTTTCTTAATGTTTTTAGTTTCCGCATTCGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGATGGTCACGGTCACGGACATGGACATGGACATGGACATGGGCACGAGGGGCACGGACATGGCCATAGCCACAGCCACGGTCATGGGTTTACAGTTTCTGCCCATCATGATGCAAAACATGCAAAAGATGAGCACCATCACACACATGATCACACAGACCGTCACGGGGAAAAACATTCAAAATATGATATCCATACTCATGAAGATCACTTGCACCATCATGATCACCAAGAGCTTACTCAATCTCTTCTTGATGAATCAAAAACTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTCCTTGGAGACTCTATCCAGAGTATTGGAGTAATGATTGGTGGAGCAGTAATATGGTATAAACCCGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATAGTGTTGGTGACAACCATCAATATGCTGCGAAATATTTTGGAAGTGCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTGTTGGATATTGAAGACGTAGTGGCTGTTCATGAACTGCACATATGGGCCATTACAGTTGGAAAGGTTTTACTAGCATGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAACGTTATAGACTACATCAAACGGGTCTATAACATCAGTCATGTAACCATACAGATAGAGCGCTAA 1266 0.4305 MEAQSSQQTQVIEISGDLPDGARKICGEAPCGFADAGSISKDSEERSTSMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPQSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHGHGHGHEGHGHGHSHSHGHGFTVSAHHDAKHAKDEHHHTHDHTDRHGEKHSKYDIHTHEDHLHHHDHQELTQSLLDESKTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATKLERGLLDIEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDNVIDYIKRVYNISHVTIQIER 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02248 421 Pfam Cation efflux family 53 343 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Viun10g02248 421 MobiDBLite consensus disorder prediction 213 242 - -
Viun10g02248 421 NCBIfam cation diffusion facilitator family transporter 50 421 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Viun10g02248 421 MobiDBLite consensus disorder prediction 182 242 - -
Viun10g02248 421 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 349 420 IPR036837 -
Viun10g02248 421 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 15 421 - -
Viun10g02248 421 MobiDBLite consensus disorder prediction 186 208 - -
Viun10g02248 421 Gene3D Cation efflux protein transmembrane domain 49 342 IPR027469 -
Viun10g02248 421 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 344 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02248 Viun-Chr10 37224773 37229361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02248 21 421 Inorganic Solute Cotransporters AT3G58810 64.838 2.68e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02248 K14689 - gmx:100794876 632.484