Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02230 ATGGCTACCCATATTTGTCTCTCTCTTTGCCTCTTCTACTTCGCAACCCTCACGTTGGCTCAGTCTGACAATTATATCATTCACATGGACACATCAGCCATGCCCAAAGCATTCTCCACCCAGCACACTTGGTACCAATCCACTCTTTCTTCAGCATTGAAAAATTCCAAATCCACCACTAATAATCTTAACTCTGTTCTTTCTTCCAAGCTTCTTTACTCCTACACCAATGTCATCAATGGTTTCAGCGCAAACCTTTCACCCAAAGAGCTTGAGGCTCTCAAAACCTCCCCCGGTTATGTTTCTTTCTTACGAGATTTACCGGCCAAGCGTGACACAACACACTCACCGAAATTTCTTGGCCTCAACCCCCATGAGGGGGCCTGGCCAGCGGCACAATTCGGCAAGGATGTCATTGTTGGTTTGGTGGACACTGGAATTTGGCCAGAAAGTGAAAGCTTCAGAGACGAGGGAATTGGTGCGGTTCCTTCACGATGGAAAGGCCAATGCGAAAGTACCATCAAATGCAACAGGAAGCTCATTGGAGCAAGGTTCTTCAACAAAGGGTTGTTGGCAAAGCACCCCAACATCACCATAGGTGCGAACTCAACACGTGACACTGAGGGTCATGGAACTCACACATCAAGCACTGCAGCTGGGAGCGTAGTCGAAGGTGCATCGTATTTCGGCTATGCTTCTGGATCAGCTACTGGAATGGCTTCAAGTGCGAGAGTTGCCATGTACAAAGCCCTGTGGGAAGATGGAGCTTACATGTCTGATATAATAGCTGCAATCGACGGTGCAATATCTGATGGGGTGGATGTTCTTTCCTTGTCATTTGGCTTCGATGATATACCTTTGTACGAGGATCCTGTTGCTATAGCAACGTTTGCAGCAATGCAGAAAAACATTTTTGTGTCGACTTCAGCAGGGAACGAAGGGCCTTTCCTCGGAAGACTTCACAATGGAATACCATGGGTCATAACTGTGGCTGCTGGCACTCTGGACCGTGAATTTCACGGGGCTCTTACTCTTGGCAATGGAGTCCAAGTAACCGGCATGTCTCTCTATCATGGAAACTTCTCCTCTGGCCATGTTCCAATTGTTTTCATGGGGTTGTGCGACAGAGTGAAGGAACTGGCCAAAGTGAGGAGCAAGATTGTGGTGTGCGAAGACAATGGAACAATCATTGATGTTCAAGTGTCAAACATTTATGAAGCAAACGTTGTCGCGGCAGTGTTCATAACAAATAGTTCCGACAGTTCGTTTTTCTTAGATAATAGCTTTGCAACAATTGTTGTTTCAACAACAGATGGGGAAATTGTGAAAGCTTACATCAAGAGCAATAACTCTAGTGCGAAAGCAAGCATGTCTTTTGAGATGACAGTTTTGGATACTAAACCAGCACCGAGTGTGGATAGTTACAGTTCCCGAGGGCCTTCGAGTAGTTGTCCATTTGTGTTGAAACCGGACATCACTGCTCCTGGTACTTCAATCTTAGCTGCATGGCCTCAAAATCTTCCGGTGGAAACGTTTGGGACCCAAAATGTTTTCAGTAACTTCAATTTGTTAAGTGGGACATCCATGGCATGCCCTCATGTTGCTGGTGTGGCAGCATTGTTAAGAGGAGCACACCCTGAATGGAGTGTTGCGTCCATTAGGTCAGCCATTGTTACAACATCAGACATGCTTGATAACACCTTGGGACCCATCAAAGACATCGGCAACGATAACAAAGCAGCCTCTCCTTTGGCATCTGGATCTGGTCACATCAACCCTAATAGAGCCCTTAACCCTGGACTTGTTTACGATGTTGGAGTTCAAGATTACGTTAATCTGCTCTGCGCTCTTGGCTTCACCCAAAGAAACATCACCGTCATCACCGGAACCTCTTCCAATGATTGTTCCAAACCTTCTTTGGATCTCAACTACCCTTCTTTTATTGCTTTTTTCAACAGCAACAATTCAAGTACAGCACAAGAATTTCAGAGAACAGTGACCCATGTTGGTGAGGGACCTGCAAGCTATGCTGCCAGCTTTATACCCGTGGAAGGGTACGAAGTTAGTGTGAGCCCTGAATTGTTAGTGTTCAAGGAGAAGTACGAGAAGTTGAGCTACACATTGAGAATTGAAGGTCCGAGAAAGAAGAAAGAGAAGAAAGTTGCTTTTGGGTATCTCATTTGGACGGACCTCCAACATGTGGTTAGGAGTCCCATTGTGGTCACCACTCTCAAATTCGATTTCTAA 2247 0.4579 MATHICLSLCLFYFATLTLAQSDNYIIHMDTSAMPKAFSTQHTWYQSTLSSALKNSKSTTNNLNSVLSSKLLYSYTNVINGFSANLSPKELEALKTSPGYVSFLRDLPAKRDTTHSPKFLGLNPHEGAWPAAQFGKDVIVGLVDTGIWPESESFRDEGIGAVPSRWKGQCESTIKCNRKLIGARFFNKGLLAKHPNITIGANSTRDTEGHGTHTSSTAAGSVVEGASYFGYASGSATGMASSARVAMYKALWEDGAYMSDIIAAIDGAISDGVDVLSLSFGFDDIPLYEDPVAIATFAAMQKNIFVSTSAGNEGPFLGRLHNGIPWVITVAAGTLDREFHGALTLGNGVQVTGMSLYHGNFSSGHVPIVFMGLCDRVKELAKVRSKIVVCEDNGTIIDVQVSNIYEANVVAAVFITNSSDSSFFLDNSFATIVVSTTDGEIVKAYIKSNNSSAKASMSFEMTVLDTKPAPSVDSYSSRGPSSSCPFVLKPDITAPGTSILAAWPQNLPVETFGTQNVFSNFNLLSGTSMACPHVAGVAALLRGAHPEWSVASIRSAIVTTSDMLDNTLGPIKDIGNDNKAASPLASGSGHINPNRALNPGLVYDVGVQDYVNLLCALGFTQRNITVITGTSSNDCSKPSLDLNYPSFIAFFNSNNSSTAQEFQRTVTHVGEGPASYAASFIPVEGYEVSVSPELLVFKEKYEKLSYTLRIEGPRKKKEKKVAFGYLIWTDLQHVVRSPIVVTTLKFDF 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02230 748 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Viun10g02230 748 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Viun10g02230 748 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Viun10g02230 748 Pfam Fibronectin type-III domain 641 741 IPR041469 -
Viun10g02230 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Viun10g02230 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 110 IPR037045 -
Viun10g02230 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 741 IPR045051 -
Viun10g02230 748 CDD PA_subtilisin_like 343 453 - -
Viun10g02230 748 Gene3D - 336 464 - -
Viun10g02230 748 ProSiteProfiles Serine proteases, subtilase domain profile. 119 597 - -
Viun10g02230 748 CDD Peptidases_S8_3 112 562 IPR034197 -
Viun10g02230 748 Gene3D - 614 744 - -
Viun10g02230 748 FunFam Subtilisin-like protease SBT1.5 137 345 - -
Viun10g02230 748 Pfam Peptidase inhibitor I9 25 108 IPR010259 -
Viun10g02230 748 Gene3D Peptidase S8/S53 domain 137 610 IPR036852 GO:0004252|GO:0006508
Viun10g02230 748 Pfam Subtilase family 135 566 IPR000209 GO:0006508|GO:0008236
Viun10g02230 748 SUPERFAMILY Subtilisin-like 112 601 IPR036852 GO:0004252|GO:0006508
Viun10g02230 748 FunFam Subtilisin-like protease SBT1.9 14 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02230 Viun-Chr10 37128642 37131050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02230 1 730 Subtilisin-like Serine Gene Family AT5G67090 45.794 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02230 - - gmx:100783026 1156.35