Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02215 ATGAGCGGGAAGCCGGTGAGACCTCGTACACGTTTGGGAAAGTACGAGCTCGGAAAAACCATTGGCGAGGGAAGCTTTGCCAAGGTCAAGTTCGCAAAGGACGTTGAGAACGGAAACCATGTAGCCATCAAAATCCTCGACCGTAACCACGTACTCAGCCACAAGATGACGGAACAGCTGAAGAAAGAAATTTCAGCGATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTATGAGGTGATGGCAAGTAAAACAAAGATCTACATTGTGCTAGAGTTGATTAATGGAGGAGAACTATTTGACAAAATAGCTCAAAGTGGGAGACTTAAAGAGGATGAAGCAAGAAGTTATTTCCACCAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGGGTGTACCACAGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTGTTCTGAAAATTACAGATTTTGGATTAAGTACCTACGCACAGAAGGAGGATGAACTTCTTCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGCTATGTTGGTTCTACATCTGATATCTGGTCCTGTGGAGTCATTCTCTTTGTGCTGATGGCTGGTTACTTGCCCTTTGATGAGCCAAGTCAAATGGCGTTGTACAGAAAGATTGGCAAGGCTCAGTTTACATGTCCATCATGGTTTTCCTCTGAGGCAAAGAAGCTATTGAAGCGTATTCTTGATCCAAACCCTTTAACTAGGATAAAAATTCCTGAAATCTTGGAAGATGAATGGTTCAGAAAAGGATACAAACCAGCAATTTTTACAGAGGAAGAAGATGTCAACGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAGTTTTGTGACGGAGACAAAAGAGAAGCCAGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCTCAAAGCTTTAATCTTGAAAATTTGTTTGAGAAGCAGACAAATGGGATTGTTAAGAGAGAAACACATTTCACGTCACAACGTCCTGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCAGTAGCTACAGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGCTTCGAAAGACTGGGGGTGACACACTGGAGTTTCATAAGTTCTACAAAACCTTTTCATCAGGGTTGCAAGACGTAGTGTGGCATTCTGAAGCAAAAATATGA 1311 0.418 MSGKPVRPRTRLGKYELGKTIGEGSFAKVKFAKDVENGNHVAIKILDRNHVLSHKMTEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELINGGELFDKIAQSGRLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKITDFGLSTYAQKEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPSQMALYRKIGKAQFTCPSWFSSEAKKLLKRILDPNPLTRIKIPEILEDEWFRKGYKPAIFTEEEDVNVDDVAAAFNDSKESFVTETKEKPVSMNAFELISRSQSFNLENLFEKQTNGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDVVWHSEAKI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02215 436 FunFam Non-specific serine/threonine protein kinase 304 431 - -
Viun10g02215 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Viun10g02215 436 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
Viun10g02215 436 Gene3D Phosphorylase Kinase; domain 1 6 94 - -
Viun10g02215 436 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02215 436 CDD CIPK_C 311 425 - -
Viun10g02215 436 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Viun10g02215 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 416 - -
Viun10g02215 436 FunFam Non-specific serine/threonine protein kinase 8 308 - -
Viun10g02215 436 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Viun10g02215 436 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02215 436 Pfam NAF domain 307 368 IPR004041 GO:0007165
Viun10g02215 436 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Viun10g02215 436 SUPERFAMILY Protein kinase-like (PK-like) 12 317 IPR011009 -
Viun10g02215 436 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02215 436 Gene3D Kinase associated domain 1, KA1 304 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02215 Viun-Chr10 36995793 37000055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02215 9 434 CBL-interacting serine-threonine protein kinases AT1G01140 73.903 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun10g02215 Pkinase 3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02215 - - gmx:100794136 818.535