Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02209 ATGGGTCAGTGCTACGGCAAGTCCAATCTCACGTCGGAAAATGAGGCTACAGCCGCAGAGGGAGCCACAGTCGACACCGCTGTGGCGGTGGCTGGATCCGCTGACGTCCCGCTCTCTCCGCTGCCGGTGAAGGGAACGCCGGCGCGGGCGAGTCCCTGGCCCAGTCCATACCCACACGGTGGCGTGACGCCGTCCCCGGCCAGAGGCACGCCGAGGAGATTTTTTCGGCGGACGTTCGCGCCTCCGTCGCCAGCGAAGCACATAAGGGCGTCGCTGGCGAAGCGGCTCGGGCACGCAAAGACGCCAAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCGGGGGCGGTGGCGACGGAACAGTCGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCGAAATATGAAATTGGGAAAGAAGTGGGTCGAGGGCATTTTGGTCATACTTGTTATGCTAAGGGGAAGAAGGGAGAACTCAAAGACCATCCTGTTGCTGTTAAGATCATTTCCAAGGCGAAGATGACAACTGCAATAGCAATTGAGGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAATATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATTCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTTAAACCTGAGAATTTCCTCTTCACTTCGAGAAGTGAAGATGCCGACATCAAGCTTATTGATTTTGGTCTATCTGACTTCATCCGGCCCGATGAAAGGCTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCGGAGGTCCTTCACCGGTCGTATAGTCTGGAAGCCGATATATGGAGTATCGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTTCCACTGCAGAAGCTAAGGACTTTGTGAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTGAGGGATGACAACCGACCACTCCCTTTAGATATATTAGTTTATAAACTAGTGAAGGCTTATCTTCTTGCAACACCACTCAAACGTGCAGCAGTGAAGGCACTTTCAAAAGCCTTGCCGGAGGATGAATTGCCCTACCTTAGGGCGCAATTCAGATTGTTGGAACCAAATAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGCTCTTGTACAGAATGCAACTGATGCAATGAGGGAGTCAAGGGTTCTTGAGATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTCGAAGAATTTTGTGCAGCTGCAATCAGCACATACCAATTGGAAGCACATGAGAGGTGGGAAGACATTGCCTCAGCTGCATTTGAACACTTTGAGGCAGAAGGCAACCGTCTGATATCTGTTGAAGAATTGGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAATTCTGAAAGACTGGATAAGAAATAGTGATGGAAAGCTTAACTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACACAGGTAG 1767 0.4793 MGQCYGKSNLTSENEATAAEGATVDTAVAVAGSADVPLSPLPVKGTPARASPWPSPYPHGGVTPSPARGTPRRFFRRTFAPPSPAKHIRASLAKRLGHAKTPKEGPIPEEEAAGAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADIKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTSTAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDDNRPLPLDILVYKLVKAYLLATPLKRAAVKALSKALPEDELPYLRAQFRLLEPNRDGLISLDNFKMALVQNATDAMRESRVLEIINAMEPLAYRKMDFEEFCAAAISTYQLEAHERWEDIASAAFEHFEAEGNRLISVEELARELNLGPSAYSILKDWIRNSDGKLNLLGYTKFLHGVTLRSSNPRHR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02209 588 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02209 588 FunFam CDPK-related kinase 1 129 224 - -
Viun10g02209 588 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 563 - -
Viun10g02209 588 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Viun10g02209 588 FunFam CDPK-related kinase 3 128 300 - -
Viun10g02209 588 MobiDBLite consensus disorder prediction 47 61 - -
Viun10g02209 588 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Viun10g02209 588 MobiDBLite consensus disorder prediction 36 79 - -
Viun10g02209 588 SUPERFAMILY EF-hand 432 577 IPR011992 -
Viun10g02209 588 CDD STKc_CAMK 135 397 - -
Viun10g02209 588 Pfam Protein kinase domain 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02209 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Viun10g02209 588 Gene3D - 410 578 - -
Viun10g02209 588 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02209 588 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Viun10g02209 588 FunFam Calcium-dependent protein kinase SK5 308 403 - -
Viun10g02209 588 FunFam CDPK-related kinase 1 434 506 - -
Viun10g02209 588 SUPERFAMILY Protein kinase-like (PK-like) 128 415 IPR011009 -
Viun10g02209 588 Gene3D Transferase(Phosphotransferase) domain 1 226 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02209 Viun-Chr10 36911287 36919102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02209 51 582 EF-hand Containing Proteins AT3G50530 62.892 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun10g02209 Pkinase 4.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02209 - - gmx:100796256 1030.78