Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun10g02191 | ATGAAGGTTCCAATGGAGGAAAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGTTTGAAAGAGTATGGAGTGAAGCTGGACAAAGGTCTGAGTACTCATGAGGTTCAGAAGCGGCGCGAGAAGTATGGTTGGAATGAGTTAGCAAAGGAGAAAGGGAAGCCCTTGTGGGAACTGGTCTTGGAACAATTTGATGACATGCTGGTGAAGATACTTCTGGCTGCAGCGTTCGTATCATTTCTCTTGGCTTATTTTCACGGAACTGACTCTGGGAAGTTTGGATTTGATGCATATGTGGAGCCACTTGTGATCATTTTGATTTTGGTCCTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAATGCTGAGAAGGCTCTTGAAGCCCTCAAAGAGTTGCAATGCGAGTCTGGGAAAGTGTTAAGGGATGGCTATTTTGTGCCTGATTTGCCTGCTAGAGAACTTCTTCCTGGTGATATTGTGGAGTTGCATGTTGGAGACAAGGTTCCCGCTGATATGAGAGTTGCGGCTTTGAAAACCTCAACATTGAGGGTTGAACAAAGTTCTTTAACTGGAGAAGCAATGCCAGTTCTCAAGGGGACAAGTCCTGTTTTCTTGGAAGACTGTGAGTTGCAGGCTAAAGAAAACATGGTATTTGCAGGCACCACTGTTGTCAATGGAGGTTGTGTATGTATCGTTATCACCACAGGAATGGAAACTGAAATTGGAAAGATACAGAAGCAGATACACGAGGCTTCTCAAGAGGAAAGTGACACCCCTTTGAAGAAGAAGCTGGATGAGTTTGGTAACAGGCTCACCACTGCAATTGGTCTAGTTTGTCTCATTGTTTGGGCTATCAACTACAAGAATTTCATTTCATGGGATGTTGTGGATGGATGGCCCTCAAACGTAAGATTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTTGCTCTTGCAGTTGCTGCAATCCCTGAAGGCCTTCCTGCAGTTATCACAACTTGTTTAGCACTGGGTACACGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTGGAAACTTTGGGATGTACTACAGTGATATGTTCAGACAAAACAGGCACTTTGACAACAAATCAGATGGCTGTGACACAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTCGACTCATTAGTGTTGAAGGCACAACTTATGATCCCAAAGATGGGGGAATTGTTGATTGGGGATGCTACAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATTTACTTCGATGGTCGTCTTTTTAGAGCCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTGTTGGTTGAAAAGATGGGAGTTGCAGATTTGAAGTCAAGGAGCAAAACTCGTGATAATGCACAACTTGCTGCAAACAACTTGATGGATGTGAACACTGTGGTGAAGTTAGGATGTTGTGAGTGGTGGAATAAAAGATCCAAAAGGGTAGCTACGTTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGCAGTTCACACGTGCAACTTGCTGATGGATCTCTGGTTCCAATAGATAATCAATGTAGGGAACTCCTTCTTCAAAGACTTCAGGAGATGAGTTCGAAGGGATTACGTTGCTTGGGTTTTTCATACAAAGATGAATTAGGAGAATTTTCAGACTATTATGCTGACACTCATCCTGCTCACAAGAAGTTGCTTGATCCAACTAACTATTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGCTTAAGAGATCCTCCTCGTGAGGAAGTTCACAATGCAATTGAAGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGAGAAATCAAATTGTTCTCTGAAGATGAGGATCTCAAAGGGCAAAGTTTGACCGGTAAGGAATTCATCACTCTTCCTCATTCAGAACAAGTTAAAATATTGTTGAGTCCTGGAGGCAAGGTTTTCTCCCGAGCTGAACCTAGACACAAGCAAGAAATTGTTAGACTGCTGAAGGAAATGGGGGAGATCGTTGCAATGACAGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTAGCCGACATAGGAATTGCCATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCATCAGATATGGTGCTTGCAGATGACAATTTTAGTACCATAGTTTCAGCTGTAGCTGAGGGTCGCTCTATTTATAACAACATGAAGTCATTTATAAGGTACATGATATCATCCAATGTTGGGGAAGTAATATCCATATTCTTGACAGCTGCATTGGGAATCCCAGAATGCATGATACCAGTGCAACTTCTATGGGTGAATTTGGTTACTGATGGTCCACCTGCAACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGCAGAAGTGATGATGCATTAATAAGTTCTTGGGTTCTTTTCCGTTATCTGGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTTTTGTGGTACACTCAAGCATCTTTTCTTGGAATCAATCTTGTGAGTGATGGTCACACAATTATAGAATTCTCCCAACTTCGAAATTGGGGGGAGTGTCCCTCATGGTCTAATTTCACTGTTACTCCATTTAATGTTGGAGGGGGTCGCTTGATCACCTTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAAGTAAAGGCCATGACTCTCTCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAAGATAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTAGCCATGTCAATATCATTAGGACTACATTGCCTCATACTCTACATCCCATTCCTTGCAGAAGTGTTTGGAGTTATTCCTCTTAGTTTTAATGAGTGGTTTATGGTCCTTTTGATATCAGCACCTGTTATTCTTATTGACGAGATTCTGAAGTTAGTGGCGAGGAGTCAAAGGAGGCTGACAAAAGAGAAAAAGGCATGA | 3171 | 0.4242 | MKVPMEEKPFPAWSWSVEQCLKEYGVKLDKGLSTHEVQKRREKYGWNELAKEKGKPLWELVLEQFDDMLVKILLAAAFVSFLLAYFHGTDSGKFGFDAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELLPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTSPVFLEDCELQAKENMVFAGTTVVNGGCVCIVITTGMETEIGKIQKQIHEASQEESDTPLKKKLDEFGNRLTTAIGLVCLIVWAINYKNFISWDVVDGWPSNVRFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTQFFTLGGKTTASRLISVEGTTYDPKDGGIVDWGCYNMDANLQVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVADLKSRSKTRDNAQLAANNLMDVNTVVKLGCCEWWNKRSKRVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDNQCRELLLQRLQEMSSKGLRCLGFSYKDELGEFSDYYADTHPAHKKLLDPTNYSSIESDLVFVGIVGLRDPPREEVHNAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSEDEDLKGQSLTGKEFITLPHSEQVKILLSPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDALISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIEFSQLRNWGECPSWSNFTVTPFNVGGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLRKLPPWRNPWLLVAMSISLGLHCLILYIPFLAEVFGVIPLSFNEWFMVLLISAPVILIDEILKLVARSQRRLTKEKKA | 1056 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun10g02191 | 1056 | CDD | P-type_ATPase_SERCA | 13 | 1045 | - | - | |
| Viun10g02191 | 1056 | Gene3D | - | 30 | 252 | - | - | |
| Viun10g02191 | 1056 | Gene3D | - | 63 | 1045 | - | - | |
| Viun10g02191 | 1056 | Pfam | E1-E2 ATPase | 134 | 348 | - | - | |
| Viun10g02191 | 1056 | Pfam | haloacid dehalogenase-like hydrolase | 365 | 746 | - | - | |
| Viun10g02191 | 1056 | SFLD | Haloacid Dehalogenase | 349 | 784 | - | - | |
| Viun10g02191 | 1056 | SUPERFAMILY | Calcium ATPase, transduction domain A | 140 | 248 | IPR008250 | - | |
| Viun10g02191 | 1056 | FunFam | Calcium-transporting ATPase, putative | 115 | 250 | - | - | |
| Viun10g02191 | 1056 | SUPERFAMILY | HAD-like | 366 | 836 | IPR036412 | - | |
| Viun10g02191 | 1056 | Gene3D | - | 365 | 777 | IPR023214 | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun10g02191 | K01537 | - | gmx:100792952 | 1970.67 |
Showing 1 to 1 of 1 entries