Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02181 ATGAATTCTGGTGCTGTCTTGATACTGCCCCCGGTGTGCAATGTGTTCGGGACTACGGAGCCTCAGGATTTTGAGGACGAGTTTGCGGAGAAAGATCCAACCGGACGGTATACAAGGTACACTGAAATCTTGGGAAGGGGTGCCTTCAAAACTGTTTATAGGGCCTTTGATGAAGTTGACGGAATTGAAGTTGCTTGGAATCAAGTTAAGATTGATGGTCTCTTGCATTCAGTTGATGATCTTGCGAAATTGTATTCTGAAGTTAATCTTTTGAAGTCTTTGAAACATGATAATATCATTAAGTTCTGTGATTCTTGGATTGATGATAAGGAGAAAACTGTTAACATGATTACTGAACTCTTCACATCAGGAAATTTAAGGCAATATCGCAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATTCTTCATGGCTTACTATATCTTCATAGTCACAAGCCACCCATTATTCATAGGGACTTGAAATGTGATAACATCTTTGTGAATGGAAACCAGGGTGAAGTTAAGATAGGGGATCTTGGTTTGGCAATTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGTCATACACAGAACTGGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTCACTTTTGAGTATCCCTATAACGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTCAGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGATCCTCAAATTAGGCAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTGAAAGATCCATTTCTACAAGTTGAGAATTTAAAGGATCCTGTCCTTTATCCTGTAAAACCACCTAGAAGAACTCTGAGAGCATACTCATTCAAGTCTAATTCTCATTCTATGGACTTGGATAGTGACTACAAACAGTTTGCTATGAGTATCTGTTCGGAAAGCAACCAAGAAAGCCCATATTGTCCTGTTTTTCAGGTTCAGAGGGCAAATATTAACAATGAGTTTAGGTTGAAAGGGACTAAAAATGATGATAACTCCGTATCACTGACCTTGCGCATTGCTGATACATGTGGTCGGGTGAGGAACATACATTTTCTCTTTTACCTTGATTCAGATACCGCAGTCTCTGTGGCCACAGAGATGGTTGAACATCTGGAGCTGGCAGATCACGATGTACCTTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTCCCCTGGTGGAATCCTTCGCATGATCGTTGGGTATGTGGTGAAATAAATCCTAATATAGATGCCCAAAACTTAATGGGAGGATGGCCATGGGCTTCTGCCATACCAAGTAGTGTTCCCTGTGATTTGGTTATTGAGGAGGATGGCTACTCTCGGACTGATACAACCCCCAAAGAAGATTTTGTGGCAGCCGATAAGAACAGCTTAATAGAAGAAAGTGGTGATAAGGCTACTTTTGAGGGTGGTTATCATTCACAAAGATCTGAAGCTTCTGAGGTAGTTGTTGAGAATGCTTCAATGAAAGATGATAGTTGTCATTATTCCAATGTTGATGCAAGTTCAAAGTGCTTAAATAGTAGGTCCATCTCTGAACTTGAGCTTGGGGATGAATATTATGAAGACTGTAAATTGCAACAAGAAAATTATTGTAGTGGGGAAGAAGTTGTGATAAATGAATACCCAACGAACTCGGGGTCAGTTCTGGGAACATCTACTAATGTTGGGAGCCAAAGAAGTAGCTGTTCTTATGTGTCTTCAGCAGTAGAGGAGATTGATCTTGAGCTACAATTTGAACTTGCTGTAATTGAGACACACTATCAGCATTGGATTGATGAACTCAACGAAATGAAGTTGGAGGCACTGGAATCCACCAGAAGGAGATGGATGGCCAAGAAGAAACTGGGTGTTCGGTGA 2001 0.4058 MNSGAVLILPPVCNVFGTTEPQDFEDEFAEKDPTGRYTRYTEILGRGAFKTVYRAFDEVDGIEVAWNQVKIDGLLHSVDDLAKLYSEVNLLKSLKHDNIIKFCDSWIDDKEKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLLYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEESYTELVDIYSFGMCILEMVTFEYPYNECKNPAQIFKKVTSGIKPASLNKVSDPQIRQFIEKCLVPASERLSAEELLKDPFLQVENLKDPVLYPVKPPRRTLRAYSFKSNSHSMDLDSDYKQFAMSICSESNQESPYCPVFQVQRANINNEFRLKGTKNDDNSVSLTLRIADTCGRVRNIHFLFYLDSDTAVSVATEMVEHLELADHDVPFIAELIDYLIMKLLPWWNPSHDRWVCGEINPNIDAQNLMGGWPWASAIPSSVPCDLVIEEDGYSRTDTTPKEDFVAADKNSLIEESGDKATFEGGYHSQRSEASEVVVENASMKDDSCHYSNVDASSKCLNSRSISELELGDEYYEDCKLQQENYCSGEEVVINEYPTNSGSVLGTSTNVGSQRSSCSYVSSAVEEIDLELQFELAVIETHYQHWIDELNEMKLEALESTRRRWMAKKKLGVR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02181 666 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02181 666 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 542 - -
Viun10g02181 666 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Viun10g02181 666 FunFam probable serine/threonine-protein kinase WNK9 121 300 - -
Viun10g02181 666 CDD STKc_WNK 36 295 - -
Viun10g02181 666 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02181 666 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02181 666 Gene3D - 375 462 - -
Viun10g02181 666 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Viun10g02181 666 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Viun10g02181 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Viun10g02181 666 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Viun10g02181 666 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02181 Viun-Chr10 36660736 36664721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02181 25 444 MAP Kinase Kinase Kinase AT5G41990 61.449 4.64e-175 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun10g02181 Pkinase 9.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02181 K08867 - gmx:100809602 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02181 10 36660736 36664721 Viun10g02181 10 36660736 36664721 ECH