Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02178 ATGAAGTCATTTCACTCAGCAGATAACATCCCCTTCGAGGAACATTTCGAAATCCATATACCAAATCAGCAGCCTGAACAAGTACACGTCAAAAGTGGTCTGCCTCACAATGACTCCGGAGATGATATTCCACCCAAAGTACACATGTGTTTTGATAGCTTAAATAATGTAAAACAATTTTATAAAAATTACGGTATTAGAAGCGGCTTTGGTATTCGCACCAGGACTTCAGCACGGGGCGAAGACAATGAAATCAACTACATCAAGTTGGTCTGTTCACGCGAGGGAAATTATGTGTCTGCTATTCCTCCAGAATTGAAGACCGTCCCCACTAAAGCAAAACAGTGTAAAGCTTCAATCACCGCAGCAAAGAAAGACGGACAATGGTTCATAAGGAGCGTTGTAACTGATCACAGTCATGACATTAGTCCGAAGAAGTCAAGGCTAATACGGGGCAACCGTAAAGTTGATATGCATTCAAGGCAAACTGTTGAAACTAACGATGACGCTGGTGTCCGAATTAACAAAAGTTTCCGCTCTCTTGTGTCTGAAGCAGGTGGATATGAACACGTTAACTTCATTGAACGTGATGTTCGCAACTACATTGGTCAACAAAGGCGATCATTGTGTAAGGATGGGGATGGGCAGGCCCTTCTACGACATTTTTCAAAAATGCGAGAATTAAACAACGACTTCATCTTTGAAATTGACATGAACGAAGACAACCGTATATGCAATGTTTTTTGGGCCGATGCGCGCAGTAGAGCGGCATCTGAGGATTTTGGTGATGTTGTGTCTTTTGACACCACATATCTGACCAACAAATATGACATGCCTTTCGCTCCTTTTGTAGGTGTTAATCACCATGGACACTCCATTTTATTAGGTTGTGGTCTAGTATCAGTTGAAGACACAAGGTCGTTCGTGTGGATTTTTGAATGCTGGCTTCGGTGCATGTATAACAAACCACCGGAAGGAATTGTTACCGACCAATGTAAGGCAATGCTTAATGCAATTGGAGAAGTTTTCCCAAATACCAAACATCGATGGTGTCTATGGCACATAATGAAAAAAGTGCCGGAAAAATTGCAAGGTTACACAAATTACAAATCTATCAAGACTGAATTGAAAAGACTAGTGTATGATTCAATCACGGTGGGTGAGTTTGAGTTGGGATGGCAGGCATTTATTGGACAATATGATTTGACCACAAACGACTGGCTCACTACATTGTTTGACGAGAGACATTGTTGGGTTCCTTGCTATCTAAAAAGTCAGTTTTGGGCTGGAATGTCAACCACCCAAAGGAGTGAAGGCCTGAACGCTTTTTTTGATGGGTTCATTAATTCGGGAACTACTTTGCAACAATTTGTTGTGCAATATGACAACGCATTACGGCAAAACGCAGAAAAAGAATTTGAAGCTGACTTTGCTTCATCCAATACCACTGTTGCATGTGGATCACAATCTCTTATTGAGAGGCAATTTCAACTAGAGTACACGCACGCCAAATTTGCGGAGGTCCAGAACGAATTTAGGGGAAAGATTAATTGTTTCGTGAAAAGGGTGTTCGAAGACGGATGTCTGTTGAACTATACTGTAAGGGAAGAGTGGTTGTGGGAGGGAAAAAAATACCACAGAATGCATGATGTTGTGCTTGACACGCTGACAACCAATATCCAATGTAGTTGTATGTTGTTTGAGTTTAGGGGCATCATGTGTCGTCACAGCTTGTTGACGCTTGGACAAGAAGACATTGAGTGCGTGCCAGAAAAATATGTTCTCCGTCGCTGGTCCAAAAATGTTAGGAGGAGGCATAGTTTGATAATAGCGGGATACAATAGAAGTAATGATGACCCACGGATGCAAAGATACAAAATCTTATGCAAGAGGTTTTACGATTTAGCGGAGGTGGCATGTGACTCAGACGCTTCATCTACGATGTTGTGCAATGAGCTGAATTCTATTGCAAAAGGATTAGGTGTCCCTACCAAATCTAATCCTTTTTTACTTACCCAACAAGGTGACATTGAAGACAATGGCGGTGAACATGTTAAATCCCATTTGAAAATTTAA 2076 0.4147 MKSFHSADNIPFEEHFEIHIPNQQPEQVHVKSGLPHNDSGDDIPPKVHMCFDSLNNVKQFYKNYGIRSGFGIRTRTSARGEDNEINYIKLVCSREGNYVSAIPPELKTVPTKAKQCKASITAAKKDGQWFIRSVVTDHSHDISPKKSRLIRGNRKVDMHSRQTVETNDDAGVRINKSFRSLVSEAGGYEHVNFIERDVRNYIGQQRRSLCKDGDGQALLRHFSKMRELNNDFIFEIDMNEDNRICNVFWADARSRAASEDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLVSVEDTRSFVWIFECWLRCMYNKPPEGIVTDQCKAMLNAIGEVFPNTKHRWCLWHIMKKVPEKLQGYTNYKSIKTELKRLVYDSITVGEFELGWQAFIGQYDLTTNDWLTTLFDERHCWVPCYLKSQFWAGMSTTQRSEGLNAFFDGFINSGTTLQQFVVQYDNALRQNAEKEFEADFASSNTTVACGSQSLIERQFQLEYTHAKFAEVQNEFRGKINCFVKRVFEDGCLLNYTVREEWLWEGKKYHRMHDVVLDTLTTNIQCSCMLFEFRGIMCRHSLLTLGQEDIECVPEKYVLRRWSKNVRRRHSLIIAGYNRSNDDPRMQRYKILCKRFYDLAEVACDSDASSTMLCNELNSIAKGLGVPTKSNPFLLTQQGDIEDNGGEHVKSHLKI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02178 691 SMART 26again6 560 587 IPR006564 GO:0008270
Viun10g02178 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 658 IPR031052 GO:0006355
Viun10g02178 691 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Viun10g02178 691 Pfam MULE transposase domain 264 358 IPR018289 -
Viun10g02178 691 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02178 Viun-Chr10 36635669 36637744 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun10g02178 MULE 3.6e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02178 - - vun:114180824 1346.26