Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02177 ATGGAGGGGATGGGTCCAAATTCATGTGCAAGGCCAGTTTTAGAGAAGAAAGCAAGACCACAAGAGCAACTGAATTGTCCAAGGTGCAATTCGACGAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAACCAAGATACTTCTGTAAGACTTGTAGAAGGTATTGGACAGAAGGAGGGTCTCTGAGAAACGTTCCGGTTGGAGGTGGTTCAAGGAAGAACAAGAAGGTTTCTTCAGCAGCAGCAGGAGCAGGAGCAGGAGGAATCACAGCTTCATCATCCTCATCATCATCATCAAAGCTTCCTGACCTAAATCCCCCAAACCTCTCTTCACAAAACCCTAAAATGTTACATGGTGGCCAGGATCTCAACCTGGCTTTCCCAGCTATGGACAACTATCATCATCCTCATCATCATGGCATCTCCCCTTATGTTGAGATGCAAAACAGTGACACCACTCATCATCATCATCACCAAAACTCTCCTTCTTGTTCTGCTGCTCCAGCCTCTCTTTCAGCTCTTGAGCTTCTGAGGTCCAGCATGGCATCAAGGGGCTTGAACCCTTATGCTCCTTCTTCCTTGATGCCAAACTCAGGAAACAACAATGCCCTTTACCCATCAGGGTTTCCCATGCAAGAAGTGAAACCAAGCCTCAGCTTTTCCTCAGTTGATGGGATGGGAAATAGATCATATGATCATCATCAGGTCCAAGAGAGGGGTGGCAGAGTTTTGTTCCCTTTTGGAGATGTCAATAAGCAGCTTTCTGCTGCAGCAGGATCAGCTGAAGTGGAACACAGTAAAGAACAACAACAACAACAACCGCAACAGGGAAACTCATCTGGATATTGGACTGGAATGATTGGTGAAGGGACATGGTAA 885 0.4599 MEGMGPNSCARPVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVSSAAAGAGAGGITASSSSSSSSKLPDLNPPNLSSQNPKMLHGGQDLNLAFPAMDNYHHPHHHGISPYVEMQNSDTTHHHHHQNSPSCSAAPASLSALELLRSSMASRGLNPYAPSSLMPNSGNNNALYPSGFPMQEVKPSLSFSSVDGMGNRSYDHHQVQERGGRVLFPFGDVNKQLSAAAGSAEVEHSKEQQQQQPQQGNSSGYWTGMIGEGTW 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02177 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 199 IPR045174 GO:0003700|GO:0006355
Viun10g02177 294 MobiDBLite consensus disorder prediction 1 21 - -
Viun10g02177 294 MobiDBLite consensus disorder prediction 258 294 - -
Viun10g02177 294 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Viun10g02177 294 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Viun10g02177 294 MobiDBLite consensus disorder prediction 65 124 - -
Viun10g02177 294 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Viun10g02177 294 MobiDBLite consensus disorder prediction 90 120 - -
Viun10g02177 294 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02177 Viun-Chr10 36629210 36631329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02177 16 294 C2C2-Dof Transcription Factor Family AT3G61850 47.195 7.68e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Viun10g02177 zf-Dof 3.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02177 - - gmx:778110 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02177 10 36629210 36631329 Viun10g02177 10 36629210 36631329 ECH
Viun6g01815 6 25348168 25350019 Viun10g02177 10 36629210 36631329 PCT