LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun10g02127	ATGGAGGCTCTCAATGCTGCAGCTTTGACCCCTCTGTCTGTGCTTTCTGATACAAAAACAACAAGAAAACAAGCTCCACTTTCTACCTGCAAAGGTTCAAGCTTTTCCACCTTTACCGACAAGAAACCAACGTTGCTCCAGAGTTGCTTGTCAAAAAGCCTGCATGGGGGGTTGTTTCTTGCAGCTTCAATTGTGAGTGGTGATGTTGCCTCAGCTTTGACGTACGAGGAGGCACTGGGACAACCTTTGAGTCTCCCCGGTGCTGGAGACTTTGATGTGAACGGTTTTGTGGAGAGTGCTACTGGCTTTGCAACTGAGAACCCTGCAATTGTTGCTGGGGGTGTGGCTATTCTGGCGCTGCCATTGGTTTTGTCTCAGGTTTTTAAGAAGCCTAAGGCGTGGGGTGTTGAGTCTGCTAAGAATGCATATGCAAAACTTGGGGCTGATGAGAATGCTCAGTTGCTTGATATAAGAGCTCCGGTGGAGATTAGGCAAGTGGGGTCCCCAGATGTTGGGGGTCTGAGGAAGAAGGCAGTGTCAATAGCTTACAAGGGTGATGATAAGCCAGGGTTCCTCAAGAAGCTTGCATTGAAGTTTAAGGAACCGGAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACCGTTAATGGATTTAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCGAGAGGATGGAAGAGTAGTGGTCTTCCTTGGTTAGCACCAAAGAAGACATTGGGTTTGGATAATCTAACGGATGCTATATCTGAAGTAATTGGAGATTCATCTGATGGTGTTACTGTTACTCTTGGGATTGCTGCAGCAGCTACTGGACTGAGCCTGTTAGCTTTTTCTGAGATAGAATCAATTCTCCAAGTTGTAGGTTCTGCTGCACTCATTCAATTTGCAAGCAAGAAACTTTTATTTGCTGAGGACCGAAAGCAAACCGTGAAACAACTTGATGAGTTCTTGAACACAAAAGTTGCCCCTAAAGAACTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCTACCAACCTCTACCAGTAAGGCTCTTCCTGCTCCAGCAGACACAACTTCAGAGCTTGCTACAGCTGATAGCACTGCACCGACAGCAGTAGCTACTCCAGTGACCAATGCAAATGCAGTAGCTCCTGCAGTAAACTCAGTGCCCAAAGCTGAAATCAAGGAAGAATCACTTCCTGTGCCACCAAGGCCACTTTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTACCCCATCACAGCCCTAG	1326	0.4608	MEALNAAALTPLSVLSDTKTTRKQAPLSTCKGSSFSTFTDKKPTLLQSCLSKSLHGGLFLAASIVSGDVASALTYEEALGQPLSLPGAGDFDVNGFVESATGFATENPAIVAGGVAILALPLVLSQVFKKPKAWGVESAKNAYAKLGADENAQLLDIRAPVEIRQVGSPDVGGLRKKAVSIAYKGDDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWKSSGLPWLAPKKTLGLDNLTDAISEVIGDSSDGVTVTLGIAAAATGLSLLAFSEIESILQVVGSAALIQFASKKLLFAEDRKQTVKQLDEFLNTKVAPKELVDEIKDIGKALLPTSTSKALPAPADTTSELATADSTAPTAVATPVTNANAVAPAVNSVPKAEIKEESLPVPPRPLSPYPYYPDFKPPTSPTPSQP	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun10g02127	441	MobiDBLite	consensus disorder prediction	365	381	-	-
	Viun10g02127	441	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	136	253	IPR036873	-
	Viun10g02127	441	Gene3D	-	133	263	IPR036873	-
	Viun10g02127	441	MobiDBLite	consensus disorder prediction	362	381	-	-
	Viun10g02127	441	MobiDBLite	consensus disorder prediction	406	441	-	-
	Viun10g02127	441	FunFam	Rhodanese-like domain-containing protein 4, chloroplastic	132	263	-	-
	Viun10g02127	441	PANTHER	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	1	441	IPR044240	-
	Viun10g02127	441	MobiDBLite	consensus disorder prediction	416	441	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun10g02127	1	431	Sulfurtransferasese or Rhodanese	AT4G01050	57.419	1.94e-150	435

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun10g02127	K17525		-	gmx:100810796	695.656

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun10g02127	10	36163991	36168941	Viun10g02127	10	36163991	36168941	ECH