Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02126 ATGGAAGAGAGTGCAAAGTGTGAACAAGTTAGTGTCATTGATGAGTTGCTGCTAGGGAAGGAGCTAACAAAGAAGCTTTGTGACCAACTATCCTCATCTTCATCATCCTCTTCCTCTTGTGACACAAATGAAGTGTTGATTGAGAAAATCATTTCCACCATGGAGAAGGCACTTGCCAAGGTGAATTGTATGGCTAATGTAGGAGAAAATAAGGCCATGATGGATTCTCATTGCTCTTTCACAAATGGTAGTCCCAAAAGTGAGGTCGTGGAGCCTGAGGTTGAGCACAAACATGTTTCTAAGAAAAGAAAGACCATGCCAAGACGGAGAGAGCAAGTGAAGGTGTGCTTGGGAACAGAAGGAAATAAAGAAGATGGCTATAACTGGAGAAAATATGGGCAGAAAGACATTCTTGGAGCCAAGTTTCCAAGGGGATATTTCAGATGCACATATAGGAACATACAAGGATGTCTGGCCACTAAGCAAGTGCAAAAGTCAGATGAAGATCCAATGATATACGAGATAACATACATAGGAAGACACACATGCACCCAAGCAGCAACAGTGGTGCCCCCATCAAAAACCAAGGTGAGAATCCAAGAAAACCAGCACCAAAACAATGAAAAGAATCAACCGCAAGAGAAAATAGAGCAACCCCCAGAGACAATTTTCTCCTTTGGACCACAAGGTGAAGTTAAAGTAGAGGACTTGGACTTGGATTTGGACCACAAGCACCAAATTTTCCCATCATTTTGCTTCTCTTCTCCATCAATAGGGTCTGAAAACGAGGAAACCAACAACATATTCTCGTACTCCATGATTGAGAACAACTTGGTGGAAAACTTCTCTCCTTCATTCATGTCTCCAACAACTTCAGAATCAGACATGTTCTGCCACTGGGAGAGCACTGGACTTGGCCAAAACGTGCATAACTCATCTTCAGATATCACTGATATAGTTTCCACGCCAACTTCAGTCACCTATTCACCAATAATGGACCTTGATTTCTTCCTTGATAAGATCGATTTCGACATAGATTTCCCTATGAACACCAGAGAACTTTGCATTTGA 1071 0.4202 MEESAKCEQVSVIDELLLGKELTKKLCDQLSSSSSSSSSCDTNEVLIEKIISTMEKALAKVNCMANVGENKAMMDSHCSFTNGSPKSEVVEPEVEHKHVSKKRKTMPRRREQVKVCLGTEGNKEDGYNWRKYGQKDILGAKFPRGYFRCTYRNIQGCLATKQVQKSDEDPMIYEITYIGRHTCTQAATVVPPSKTKVRIQENQHQNNEKNQPQEKIEQPPETIFSFGPQGEVKVEDLDLDLDHKHQIFPSFCFSSPSIGSENEETNNIFSYSMIENNLVENFSPSFMSPTTSESDMFCHWESTGLGQNVHNSSSDITDIVSTPTSVTYSPIMDLDFFLDKIDFDIDFPMNTRELCI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02126 356 MobiDBLite consensus disorder prediction 198 218 - -
Viun10g02126 356 FunFam WRKY transcription factor 53 109 186 - -
Viun10g02126 356 SUPERFAMILY WRKY DNA-binding domain 122 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g02126 356 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02126 356 ProSiteProfiles WRKY domain profile. 118 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02126 356 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 306 IPR044810 GO:0003700
Viun10g02126 356 Pfam WRKY DNA -binding domain 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02126 356 Gene3D WRKY domain 100 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02126 Viun-Chr10 36145180 36147494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02126 7 217 WRKY Transcription Factor Family AT4G23810 36.842 9.24e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun10g02126 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02126 - - gmx:100170747 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02126 10 36145180 36147494 Viun10g02126 10 36145180 36147494 ECH
Viun2g02663 2 32221503 32223221 Viun10g02126 10 36145180 36147494 ECH
Viun6g01765 6 24991923 24994292 Viun10g02126 10 36145180 36147494 PCT