Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02112 ATGGAACAATTTAGGCAAATTGGGGAGGCACTGGGGGCTTTGAAATCTGTGATGGTATTCCGGGAGAACATTCAAATAAATCAGAGGCAATGTTCTCTGCTGTTTGATGTGTTCAACTCTGCATATGAGTGTATTGCAGATGAGATTACACAGAACCTGCAATTTGAAGAGAAGAATGTGAAGTGGAAGATTTTAGAGCAACCCCTGAGGGAGATCCATAAAATTTTCAGAGAAGGTGAAACATACATTAGGCAATGCATGGAAACAAAGGATTGGTGGGCGAAAGCCATTACCTTGTGCCACAACACAGATTGTGTTGAGTTTCACATACACAATCTGCTTTGTTGCATGCCGGTAGTAATTGAAGCTATAGAGTCTGCAGGAGAAACATCAGGGTTGGATCAAGAGGAGATGCAAAGGAAGAAGTACATAAACTCTAACAAATACAAGAAAGAGTATAGAGACATGAAGCTTTTCCAATGGAAATTTGGGAAGCAGTACCTCATCACTCAGGACTTGTGCAACCGTTATGATAGTGTTTGGAAGGAAGATAGATGGTTCCTTTACAACAAAATCCTAGAAAAGAAAGTGGAAGGTGTGACAAAGTATGAGAAAAAATTGATAGATTTGCTTCTGAGAAATTTGGAAATAGCAGAATCAGTAGCAGGGAGGCTCCTTCCGAGCTCAATATTGGTTGGATCTAAGGACTTTCAGGTGAGGAGAAGAATGGGGAATGCGAGCCAGTACAAGGAGATTTCGTGGTTAGGTGAAAGCTTTGTGATAAGACATTTTACTGGGGACATTGAAGCTTTGCAACCTGAGATCATAGACCTTTTATCTCTTTCCCATCCAAATATAATGGACTGCCATGGTGGTTTTACTGATGAGGAGAAGAAAGAGTGTTTTTTGCTGATGGAACTCATGAGCAAAACACTTTCCACCCACATCAAAGAGATTCACGGTCCAAGAAGGCGAATACCGTTCTTGCTTCACGTAGCAATTGATATCATGCTTCAGATTTCCAGAGGAATGGAGTATTTGCATTCAAAGAAAGTGTATCATGGAGAACTAAACCCTTCAAGCATTCTTGTTAAGCCTAGAAGTGCATCCCCAGAGGGTTACTTGCACACCAAGGTAACTGGATTTGGACTAACTTCTGTGAAGGATTTGAATCAGAAAGGGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCTGAAGTACTTGAGCAGGAAAACTCAGGAGGCACACCAAACTCCAAGTACACAGAGAAATCTGATGTATACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGCAAAGTCCCTTTTGAAGATAGTCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACTTAATTCACCCAAATATGTCATAAACTTGACAAAGAGATGTTGGCATATTGATCCACATCAACGTCCAAGCTTTTCTACCATATGTAGAGTTCTTCGCCATATAAAAAGATTTCTTATTATGAATCCTGGTTACAGTACTCAGCCAGAACCACCAGTGCCATCACTAGATTATTGTGATGTAGAGTCACTGCTTCTGAAGAAGTTTCCTTCTTGGGGAAGTTCTGAACCTGCACCAGTATCAATAATCCCATTTCAAATGTTTTCCTATCAAGTTGTTGAACGAGAAAAAATAACTGCATGCTGTAAGGATAACTATGAGTCTGGAAGTGATGCTTCAGCTTGTGGTGATGAACTTGTTACTTCAGGGGATGAACCGTTTCCATCCACAGCTGAAAGGAAGTCTTTGCTTGGAAATGATATTATGAACAGAAAAATTATTTTGACCAGGAAATCTCTTGATTTGAAGCTCACCAAACAACCAGGTACAACGAAAGGGAGAACAGCAAGACCTCCACAAATGTCCCCTCGTGCAAGTATGAGAATTCCATCAGAGAACCATATATCAAGTTCAAGGGCAATAAGAAGAGTATCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2040 0.4088 MEQFRQIGEALGALKSVMVFRENIQINQRQCSLLFDVFNSAYECIADEITQNLQFEEKNVKWKILEQPLREIHKIFREGETYIRQCMETKDWWAKAITLCHNTDCVEFHIHNLLCCMPVVIEAIESAGETSGLDQEEMQRKKYINSNKYKKEYRDMKLFQWKFGKQYLITQDLCNRYDSVWKEDRWFLYNKILEKKVEGVTKYEKKLIDLLLRNLEIAESVAGRLLPSSILVGSKDFQVRRRMGNASQYKEISWLGESFVIRHFTGDIEALQPEIIDLLSLSHPNIMDCHGGFTDEEKKECFLLMELMSKTLSTHIKEIHGPRRRIPFLLHVAIDIMLQISRGMEYLHSKKVYHGELNPSSILVKPRSASPEGYLHTKVTGFGLTSVKDLNQKGNTNQNGTPPFIWYSPEVLEQENSGGTPNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDPHQRPSFSTICRVLRHIKRFLIMNPGYSTQPEPPVPSLDYCDVESLLLKKFPSWGSSEPAPVSIIPFQMFSYQVVEREKITACCKDNYESGSDASACGDELVTSGDEPFPSTAERKSLLGNDIMNRKIILTRKSLDLKLTKQPGTTKGRTARPPQMSPRASMRIPSENHISSSRAIRRVSSGHVSDSELS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02112 679 Gene3D Transferase(Phosphotransferase) domain 1 255 513 - -
Viun10g02112 679 Pfam Protein tyrosine and serine/threonine kinase 269 502 IPR001245 GO:0004672|GO:0006468
Viun10g02112 679 FunFam Kinase family protein 234 516 - -
Viun10g02112 679 MobiDBLite consensus disorder prediction 628 679 - -
Viun10g02112 679 MobiDBLite consensus disorder prediction 650 679 - -
Viun10g02112 679 PANTHER SERINE-THREONINE PROTEIN KINASE 261 507 - -
Viun10g02112 679 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Viun10g02112 679 ProSiteProfiles Protein kinase domain profile. 226 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02112 679 SUPERFAMILY Protein kinase-like (PK-like) 259 516 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02112 Viun-Chr10 35978600 35981823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02112 274 503 MAP Kinase Kinase Kinase AT5G58950 29.614 8.83e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Viun10g02112 PK_Tyr_Ser-Thr 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02112 - - gmx:100813704 1191.02