Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02111 ATGAGAGAGATCAAGCAGCACAGCACAATGTGCAGTAGCAGCTTCATCTTCATCTTCTTCCTCCTCATTGGACCAATCTTTTCCCTTTCCTCTTCAACACCCATCAGCAGAAGAATCCTCCACCAACCATTTCTACCTGAAGGAGGTTCTCCACCTCCCTCTGTTCCCCCAAACCCTCCTCCACAACCTTCTCCTTCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCAACAATGCTTCAACACCCTTCTTCCCCACATACCCTTCTCCCCCACCCCCTCCTTCTCCTTCGGCCTATGCTTCTTTCCCTGCTAACATATCCTCCCTCATCCTTCCCCAATCCTCAAAGTCCAAATCTTCCTCCAAAAAACTCGTCGCCGTCGCCATCTCCGCCGTCGCCTGCGCCCTCGCCGTTGTCTCGCTCTCAGCCTTCGTCTACTGCCGCCGCCGACGTCAAAGCTACTCCGCCGACGAGAAAACGCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTTCTGTTCCCACTGGCGGGGGCCGCAAACCGAGAAACACCTCTTCTAACAGCTCCGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGCGGCGGCGGCGTCGATGAGCTCTCTGAGCCGCACGCTGCCGCGTTGAACCCCCGTAAAATGGATTCGCCGGAGCTGCAACCGCTTCCGCCACTGGCGAGACAGGCTTCCAGGCTTAGAGAGGAATCGGCGGCGACGGTGGAGGATGATGAAGAGGAGTTCTACTCGCCGAGAGGGTCGTTGAATGGAAGAGAAGGCTCCATTGGAACCGGATCGGGTTCTCGGCGAGTTTTCTCTGCCATTGCCGCGGAGAATTTAGTTGGTCGTAGCAGCAGTGAGTCTACAAGTTCATCTTACTCTTCTTCCTCTTCTGCGTCCCCGGATCGCTCTCATTCCATTAGTCTCTCTCCTCCAGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCTGAGAATACCGTGGCACACCATTCTCCACCGCTACCTACAGCGGCGATTAGAAGATCGCCGTCCTTGTCCACACTGTCGTCGCCTTCGCCTGGTTTCGGGCAGCACATGCCGTCTTCGTCGTCAATGTCGTCGACGCCGGAGCGGAGGGAGTGTCAGTCGCCATCGCTGTCTCCGCTTTCTCTGTCGCCGAGGAAAAACCCAAACCCAGATGGTGAATCACCCCCAGGACTTGTTTTACTTGAAAAGACGCAATCTTTTGGTTCGTCTAAGTCCAAAAGCGACATTGGGTCGCCGAGATTGTCCAATGCCTCTTCCATTGGGAAGTCCTCGGCGTTTTCTCTGCCCTCGCCGGATAAAGGGATGAACTTGCATCATGGGTTGGATCAGTCTCCGACCATATCCGATGTTTCAGATCGGTTTAGACATTCTCCTCTGTCATCATTACATTTGTCACCGACATTACTTTCATCGCCGGAGAGGGAGTTGAGCCCTCAGCCTCAGCGGCAGTCTCAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCTGAGCATCAGTCTCTGCCTCAACCTCAACCTCAACTGCCACCTTCACGGAAACACTGGGAGATTCCTGACTTGTTGACACCAATCGGCGAGACACCGATTTTTTCAGCTCCTCAGAGGAAACAATGGGAAATTCCGGTTCTTTCAGTACCAATTGCTCCATCGAGTAGTAGTGTTTTAGCCCCTGCTCCACCACCGCCGCCGCCACCACCTCCGCCAGTTCCGCGGCAACGTAAGCAGTGGGAGATGCCAGTGCCTTCTCCCGTGACGCCGGTGGGTCAACAGGTTTCGAGGCCGCCGGCGCTGACGCCTCCTTCTAGGCCTTTTGTGTTGCAAACCCCAAATACAATGGTTTCTCCGGTGGAGTTGCCACCTGTTAGTTCCCAGAATTTCGAGGAGAGCTCTGAGGAGTCATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCAAGCTCTGATCGTGAGATGGTGTGGGATCAATTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATCGAAACCTTGTTTGTAGTGAATACACCAAACGCAAAGCCTAAGGACACAACTCCTCGCTCGGTTCTTGCCCCGCAAAATCAAGAGGATAGGGTGCTGGATCCTAAAAAGTCCCAGAACATTGCTATCTTGTTAAGAGCACTTAATGTGACTATTGAAGAAGTGTGCGAATCACTGTTAGAAGGTATCACTGATACACTTGGAACTGAACTGCTTGAAAGCTTGTTGAAAATGGCACCAAGCAAGGAGGAAGAACGCAAACTGAAGGAACATAAAGACGATTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTCGATGTACCTTTTGCATTCAAAAGGGTCGAAGCAATGCTTTACATAGCCAATTTTGAGTCCGAAGTAGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCATGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTAAAAACCGGCAACCGGATGAACGTGGGGACGAACCGCGGCGATGCACATGCATTCAAACTCGACACACTTCTCAAGCTAGTTGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTTCACTTTGTCGTACAAGAAATCATCAGAACCGAAGGCGCTCGTCTCTCAGGCACCAACCAAACACCTGGCGGCGCGACGAACTCAAACTCGAATTCGAACTCGAACTCGAACGACGATGCCAAGTGCAGAAGGCTGGGCCTGCAAGTGGTGTCTAGTCTGAGTTCCGACCTGGCGAATGTGAAGAAAGCAGCTGCAATGGACTCTGAAGTTTTGAGCAGCGAGGTGGCGAAGCTGTCGAAAGGAATGGCACACATTGCAGAGGTTTTGCAGTTGAACGAAGCAGCAGGGTCAGATGAGAGCAAGCAGAAGTTCAGAGAGTCGATGAAGAGGTTCACGAGAATGGCCGAGGAGGAGATACTGAAGGTGCAAGCACAAGAGAGTGTTGCTTTGTCGCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACCTGTCAAAGGAAGAGGCTCATCCGTTTAGAATCTTCATGGTGGTGAGAGATTTCTTAACGGTTCTGGATAGGGTGTGCAAAGAAGTTGGGATGATAAACGAGAGAACGATGGTTAGTTCTGCACATAGATTCCCTGTCCCAGTGAACCCTATGCTTCCACAACCTCTTCCTGGTCTTGTCGGAAAGAGACAGTACAGTTCCTCAGATGATGATAGTTCATCTCCTTAG 3354 0.5182 MREIKQHSTMCSSSFIFIFFLLIGPIFSLSSSTPISRRILHQPFLPEGGSPPPSVPPNPPPQPSPSPSPPNPKYPFSTTPTNNASTPFFPTYPSPPPPPSPSAYASFPANISSLILPQSSKSKSSSKKLVAVAISAVACALAVVSLSAFVYCRRRRQSYSADEKTLRSDSSIRLFPREASVPTGGGRKPRNTSSNSSEFLYLGTIVNSRGGGVDELSEPHAAALNPRKMDSPELQPLPPLARQASRLREESAATVEDDEEEFYSPRGSLNGREGSIGTGSGSRRVFSAIAAENLVGRSSSESTSSSYSSSSSASPDRSHSISLSPPVSISPRRSQPKSPENTVAHHSPPLPTAAIRRSPSLSTLSSPSPGFGQHMPSSSSMSSTPERRECQSPSLSPLSLSPRKNPNPDGESPPGLVLLEKTQSFGSSKSKSDIGSPRLSNASSIGKSSAFSLPSPDKGMNLHHGLDQSPTISDVSDRFRHSPLSSLHLSPTLLSSPERELSPQPQRQSQPQPQPQPQPQPQPEHQSLPQPQPQLPPSRKHWEIPDLLTPIGETPIFSAPQRKQWEIPVLSVPIAPSSSSVLAPAPPPPPPPPPPVPRQRKQWEMPVPSPVTPVGQQVSRPPALTPPSRPFVLQTPNTMVSPVELPPVSSQNFEESSEESSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNAKPKDTTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCESLLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPGGATNSNSNSNSNSNDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLSSEVAKLSKGMAHIAEVLQLNEAAGSDESKQKFRESMKRFTRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYSSSDDDSSSP 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02111 1117 SUPERFAMILY Formin homology 2 domain (FH2 domain) 586 1076 - -
Viun10g02111 1117 Gene3D Formin, FH2 domain 649 1073 IPR042201 -
Viun10g02111 1117 SMART it6_source 655 1079 IPR015425 -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 42 103 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 580 601 - -
Viun10g02111 1117 PANTHER FORMIN-RELATED 392 1105 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun10g02111 1117 MobiDBLite consensus disorder prediction 89 103 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 421 455 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 244 555 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 642 665 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 913 939 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 508 538 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 176 195 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 293 342 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 642 656 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 249 266 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 356 406 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 577 628 - -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 46 76 - -
Viun10g02111 1117 Pfam Formin Homology 2 Domain 657 1064 IPR015425 -
Viun10g02111 1117 MobiDBLite consensus disorder prediction 466 507 - -
Viun10g02111 1117 ProSiteProfiles Formin homology-2 (FH2) domain profile. 655 1090 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02111 Viun-Chr10 35969561 35974234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02111 37 273 FH2 protein (formin) Gene Family AT3G25500 44.841 1.04e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02111 - - var:108322602 1706.42