Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02086 ATGCAGCTGAATAAACTTGTTGGGACATATTTGACTCGGTGCTTTTCTTCTGGTGATTGCCTCATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACGGATCAGACCAATCAGACAAATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCGACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCCCCTTATGCAGCATTTTATCCTCCTGGAGGGGTCTATACTCACCCTGCAGTTGCTATTGGGACACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCTGGAAATACTGATCAGGGATTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGCCCGATTTCCAAAGAGACTGCATCTTCGAAAATGATTATGCCTGCTACCCCAGCTAGTATTGCAGGAAAGTTTGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAACTCTTTGACTGTTCATTCTAAGGAAAATCTCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTTTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTGAGTACTGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACACTGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1344 0.4531 MQLNKLVGTYLTRCFSSGDCLMGNSEEGKSVKTGSPSSPATTDQTNQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGTHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPISKETASSKMIMPATPASIAGKFVGPVISSGMTTALELRNSLTVHSKENLTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSALREKLINTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSADTESDFCENKPNSGAKLHQLLDTNPRADAVAAG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02086 447 MobiDBLite consensus disorder prediction 134 153 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 225 243 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 181 209 - -
Viun10g02086 447 Pfam Disordered region downstream of MFMR 153 281 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 302 330 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 210 224 - -
Viun10g02086 447 FunFam G-box binding factor 3 305 360 - -
Viun10g02086 447 CDD bZIP_plant_GBF1 307 355 IPR045314 GO:0003700|GO:0006355
Viun10g02086 447 Pfam G-box binding protein MFMR 22 119 IPR012900 -
Viun10g02086 447 MobiDBLite consensus disorder prediction 391 414 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 26 52 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 391 431 - -
Viun10g02086 447 SMART brlzneu 302 366 IPR004827 GO:0003700|GO:0006355
Viun10g02086 447 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 304 367 IPR004827 GO:0003700|GO:0006355
Viun10g02086 447 SUPERFAMILY Leucine zipper domain 305 360 IPR046347 GO:0003700|GO:0006355
Viun10g02086 447 PANTHER G-BOX-BINDING FACTOR 3-RELATED 22 414 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun10g02086 447 MobiDBLite consensus disorder prediction 28 52 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 124 155 - -
Viun10g02086 447 Pfam bZIP transcription factor 302 364 IPR004827 GO:0003700|GO:0006355
Viun10g02086 447 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 309 324 IPR004827 GO:0003700|GO:0006355
Viun10g02086 447 Gene3D - 305 359 - -
Viun10g02086 447 MobiDBLite consensus disorder prediction 181 243 - -
Viun10g02086 447 Coils Coil 329 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02086 Viun-Chr10 35784061 35788608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02086 22 447 bZIP Transcription Factor Family AT2G46270 48.624 1.95e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g02086 MFMR_assoc 3.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02086 K09060 - gmx:547789 663.685