Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02085 ATGCAGCTGAATAAACTTGTTGGGACATATTTGACTCGGTGCTTTTCTTCTGGTGATTGCCTCATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACGACCAATCAGACAAATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCGACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCCCCTTATGCAGCATTTTATCCTCCTGGAGGGGTCTATACTCACCCTGCAGTTGCTATTGGGACACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCTGGAAATACTGATCAGGGATTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGCCCGATTTCCAAAGAGACTGCATCTTCGAAAATGATTATGCCTGCTACCCCAGCTAGTATTGCAGGAAAGTTTGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAACTCTTTGACTGTTCATTCTAAGGAAAATCTCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTTTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTGAGTACTGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACACTGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1338 0.4529 MQLNKLVGTYLTRCFSSGDCLMGNSEEGKSVKTGSPSSPATTTNQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGTHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPISKETASSKMIMPATPASIAGKFVGPVISSGMTTALELRNSLTVHSKENLTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSALREKLINTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSADTESDFCENKPNSGAKLHQLLDTNPRADAVAAG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02085 445 MobiDBLite consensus disorder prediction 26 50 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 122 153 - -
Viun10g02085 445 Pfam bZIP transcription factor 300 362 IPR004827 GO:0003700|GO:0006355
Viun10g02085 445 Gene3D - 303 357 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 298 328 - -
Viun10g02085 445 FunFam G-box binding factor 3 303 358 - -
Viun10g02085 445 SMART brlzneu 300 364 IPR004827 GO:0003700|GO:0006355
Viun10g02085 445 Coils Coil 327 347 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 179 241 - -
Viun10g02085 445 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 302 365 IPR004827 GO:0003700|GO:0006355
Viun10g02085 445 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 307 322 IPR004827 GO:0003700|GO:0006355
Viun10g02085 445 MobiDBLite consensus disorder prediction 132 151 - -
Viun10g02085 445 Pfam G-box binding protein MFMR 22 117 IPR012900 -
Viun10g02085 445 MobiDBLite consensus disorder prediction 283 328 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 179 207 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 223 241 - -
Viun10g02085 445 SUPERFAMILY Leucine zipper domain 303 358 IPR046347 GO:0003700|GO:0006355
Viun10g02085 445 PANTHER G-BOX-BINDING FACTOR 3-RELATED 22 412 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun10g02085 445 MobiDBLite consensus disorder prediction 28 50 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 208 222 - -
Viun10g02085 445 CDD bZIP_plant_GBF1 305 353 IPR045314 GO:0003700|GO:0006355
Viun10g02085 445 MobiDBLite consensus disorder prediction 389 412 - -
Viun10g02085 445 MobiDBLite consensus disorder prediction 389 429 - -
Viun10g02085 445 Pfam Disordered region downstream of MFMR 151 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02085 Viun-Chr10 35784060 35788608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02085 22 445 bZIP Transcription Factor Family AT2G46270 48.387 1.75e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g02085 MFMR_assoc 3.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02085 K09060 - gmx:547789 662.914