Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02084 ATGCAGCTGAATAAACTTGTTGGGACATATTTGACTCGGTGCTTTTCTTCTGGTGATTGCCTCATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACGGATCAGACCAATCAGACAAATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCGACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCCCCTTATGCAGCATTTTATCCTCCTGGAGGGGTCTATACTCACCCTGCAGTTGCTATTGGGACACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCTGGAAATACTGATCAGGGATTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGCCCGATTTCCAAAGAGACTGCATCTTCGAAAATGATTATGCCTGCTACCCCAGCTAGTATTGCAGGAAAGTTTGTTGGTCCTGTAATTTCTTCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTTTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTGAGTACTGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACACTGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1260 0.4516 MQLNKLVGTYLTRCFSSGDCLMGNSEEGKSVKTGSPSSPATTDQTNQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGTHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPISKETASSKMIMPATPASIAGKFVGPVISSAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSALREKLINTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSADTESDFCENKPNSGAKLHQLLDTNPRADAVAAG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02084 419 MobiDBLite consensus disorder prediction 134 153 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 225 243 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 181 209 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 210 224 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 276 301 - -
Viun10g02084 419 SMART brlzneu 274 338 IPR004827 GO:0003700|GO:0006355
Viun10g02084 419 MobiDBLite consensus disorder prediction 26 52 - -
Viun10g02084 419 Pfam Disordered region downstream of MFMR 153 267 - -
Viun10g02084 419 SUPERFAMILY Leucine zipper domain 277 332 IPR046347 GO:0003700|GO:0006355
Viun10g02084 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 281 296 IPR004827 GO:0003700|GO:0006355
Viun10g02084 419 PANTHER G-BOX-BINDING FACTOR 3-RELATED 22 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun10g02084 419 MobiDBLite consensus disorder prediction 363 386 - -
Viun10g02084 419 FunFam G-box binding factor 3 277 332 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 28 52 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 124 155 - -
Viun10g02084 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 276 339 IPR004827 GO:0003700|GO:0006355
Viun10g02084 419 Pfam G-box binding protein MFMR 22 119 IPR012900 -
Viun10g02084 419 CDD bZIP_plant_GBF1 279 327 IPR045314 GO:0003700|GO:0006355
Viun10g02084 419 Pfam bZIP transcription factor 274 336 IPR004827 GO:0003700|GO:0006355
Viun10g02084 419 Coils Coil 301 321 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 181 243 - -
Viun10g02084 419 Gene3D - 277 331 - -
Viun10g02084 419 MobiDBLite consensus disorder prediction 363 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02084 Viun-Chr10 35784060 35788608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02084 22 419 bZIP Transcription Factor Family AT2G46270 51.225 2.45e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g02084 MFMR_assoc 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02084 K09060 - gmx:547789 607.446