Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02083 ATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACGACCAATCAGACAAATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCGACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCCCCTTATGCAGCATTTTATCCTCCTGGAGGGGTCTATACTCACCCTGCAGTTGCTATTGGGACACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCTGGAAATACTGATCAGGGATTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGCCCGATTTCCAAAGAGACTGCATCTTCGAAAATGATTATGCCTGCTACCCCAGCTAGTATTGCAGGAAAGTTTGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAACTCTTTGACTGTTCATTCTAAGGAAAATCTCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTTTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTGAGTACTGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACACTGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1275 0.4541 MGNSEEGKSVKTGSPSSPATTTNQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGTHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPISKETASSKMIMPATPASIAGKFVGPVISSGMTTALELRNSLTVHSKENLTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSALREKLINTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSADTESDFCENKPNSGAKLHQLLDTNPRADAVAAG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02083 424 Coils Coil 306 326 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 101 132 - -
Viun10g02083 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Viun10g02083 424 MobiDBLite consensus disorder prediction 1 29 - -
Viun10g02083 424 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Viun10g02083 424 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Viun10g02083 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Viun10g02083 424 FunFam G-box binding factor 3 282 337 - -
Viun10g02083 424 Pfam Disordered region downstream of MFMR 130 258 - -
Viun10g02083 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Viun10g02083 424 MobiDBLite consensus disorder prediction 158 220 - -
Viun10g02083 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 392 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun10g02083 424 MobiDBLite consensus disorder prediction 368 408 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 368 391 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 111 130 - -
Viun10g02083 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Viun10g02083 424 Gene3D - 282 336 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 187 201 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 158 186 - -
Viun10g02083 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Viun10g02083 424 MobiDBLite consensus disorder prediction 202 220 - -
Viun10g02083 424 MobiDBLite consensus disorder prediction 280 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02083 Viun-Chr10 35784055 35788608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02083 1 424 bZIP Transcription Factor Family AT2G46270 48.387 1.45e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g02083 MFMR_assoc 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02083 K09060 - gmx:547789 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02083 10 35784055 35788608 Viun10g02083 10 35784055 35788608 ECH