Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02082 ATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACGGATCAGACCAATCAGACAAATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCGACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCCCCTTATGCAGCATTTTATCCTCCTGGAGGGGTCTATACTCACCCTGCAGTTGCTATTGGGACACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCTGGAAATACTGATCAGGGATTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGCCCGATTTCCAAAGAGACTGCATCTTCGAAAATGATTATGCCTGCTACCCCAGCTAGTATTGCAGGAAAGTTTGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAACTCTTTGACTGTTCATTCTAAGGAAAATCTCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTTTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTGAGTACTGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACACTGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1281 0.4543 MGNSEEGKSVKTGSPSSPATTDQTNQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGTHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPISKETASSKMIMPATPASIAGKFVGPVISSGMTTALELRNSLTVHSKENLTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSALREKLINTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSADTESDFCENKPNSGAKLHQLLDTNPRADAVAAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02082 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Viun10g02082 426 Pfam Disordered region downstream of MFMR 132 260 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 160 222 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 370 410 - -
Viun10g02082 426 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Viun10g02082 426 Gene3D - 284 338 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 370 393 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 113 132 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 160 188 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 189 203 - -
Viun10g02082 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 394 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun10g02082 426 MobiDBLite consensus disorder prediction 204 222 - -
Viun10g02082 426 Coils Coil 308 328 - -
Viun10g02082 426 MobiDBLite consensus disorder prediction 103 134 - -
Viun10g02082 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Viun10g02082 426 MobiDBLite consensus disorder prediction 1 33 - -
Viun10g02082 426 FunFam G-box binding factor 3 284 339 - -
Viun10g02082 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Viun10g02082 426 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Viun10g02082 426 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Viun10g02082 426 MobiDBLite consensus disorder prediction 283 309 - -
Viun10g02082 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02082 Viun-Chr10 35784055 35788608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02082 1 426 bZIP Transcription Factor Family AT2G46270 48.624 1.21e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g02082 MFMR_assoc 3.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02082 K09060 - gmx:547789 663.685