Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02051 ATGGAAAACCAAAACCCTCCACTAGAAAACTCTTCTCCCTTCGTTTTCACTCCCACGTCAATGATGCAAAACCCTTTGGAGCCTCAGGGCTTGCATGATGACATAGACTGGGTTAACCTTTTCTCTGGCCAAAACAGTTTCCTTGGGGATGCAAAGGCCACGATGGAATACGCTTCTTCTTCGTCTTCATCGTCGTCGTCTTCGTCATCCTTGTCGTGTGCTTTGATGGCAGAAAATGGTGCTAACATGGATGACAAGAATGATAAAGAGAAAAGGAAAGGAGGGAGAGTGAAGAAGACGACACGACCCAGGTTTGCGTTTCAGACCAGAAGTGCAGATGATATTCTGGATGATGGTTATCGTTGGAGGAAGTATGGACAGAAAGCTGTGAAGAACAACATGCATCCCAGAAGCTACTACCGGTGCACGCATCATACATGCAATGTAAAGAAACAGGTGCAAAGGTTGTCTAAAGACACAAGCATCGTGGTGACCACTTACGAGGGAATTCACAATCATCCATGCGAAAAGCTCATGGAAACCCTAACACCTCTTCTCAAGCAGATGCAGTTTCTCTCTAGGTTAGGTTCCAATAACAACGCTTCTCCTGCTTCTCTGCTATAG 624 0.4567 MENQNPPLENSSPFVFTPTSMMQNPLEPQGLHDDIDWVNLFSGQNSFLGDAKATMEYASSSSSSSSSSSSLSCALMAENGANMDDKNDKEKRKGGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSRLGSNNNASPASLL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02051 207 MobiDBLite consensus disorder prediction 1 26 - -
Viun10g02051 207 FunFam WRKY transcription factor 57 102 176 - -
Viun10g02051 207 Gene3D WRKY domain 101 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g02051 207 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02051 207 SUPERFAMILY WRKY DNA-binding domain 109 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g02051 207 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02051 207 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g02051 207 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 178 IPR044810 GO:0003700
Viun10g02051 207 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02051 Viun-Chr10 35476274 35478909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02051 93 195 WRKY Transcription Factor Family AT1G64000 75.728 7.58e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun10g02051 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02051 - - gmx:100810669 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02051 10 35476274 35478909 Viun10g02051 10 35476274 35478909 ECH
Viun5g00820 5 5164471 5165348 Viun10g02051 10 35476274 35478909 PCT