Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02040 ATGGACTTTTTGGGGCCTTTTGGCAAAGTTGTCGAAGGAGTGATTGATTTTGTGTCGAAAAATGGTGTTCGACACATGACTTACATAGTCCATTACAATGAAAATGTTCGTGAACTGAAGGATAGTGTCAGAGATCTTAAATTTGAAAAACAAAGGATAATTCACCAATGTGAAGAGGGTACAAAAAATCTAAACAACATTGAAGAAAAGGTTACTGAATGGGTTCGAAAAGTGAGTGAAATTGATACTACAATAGAGGTGTTTGAGAACGATGATGGCCACACAAAGGCCCGATCACCCAATTGTTTTGTTTTTCCGTACTTGTGGAATAGACATAGGTTGGGAAGACAAGCATATAAGGAGAAAGTGAATGTTAAAAGGCTAATTGATGAGTCCCCTAAAGTTGATGAAGTTTTGTATAGGCAAAATGTAACATCTAATGATGCCACATTGTCTAATTGTGGTTTTGTAGAATTTAGTTCTATAAAATCCACAATGGAAAAAGTAATGATCGAACTTCAAGATTCCAGTGTGAGAATGATTGGATTGTATGGGCGAGGGGGTGTGGGTAAAAGCACTTTAGTCAAAGAAATTGCAAGGAAGGCTAAAGAGAAAAAGTTGTTTGATGTGGTGGTTAAAGTAGAGATAACAGCTGACCCCAATCCACAAAAAATTCAGGAAGAAATTGCTTACGTGTTGGGTTTGAGATTGGAAGGGGAAGGTGAAAATGTGAGAGCTGATTGTCTACGAAGGAGGCTAAAGAAAGAATCAGGGAACATCCTTTTAATCTTAGATGACCTTTGGGACAAATTAGATTTGAACAAGTTAGGGATTCCACTTGATGATGATGAAGATGATGATGATTTTAATAGTGGTAACAAGGATCTTAGTCGCCAAAAAAATAAAGATAACAAGGATCCTAATCAGAAAACACAAGAAAAAAAAGATGACAATCGCACAGTGTTGAAAAAAGAAAAATTCCTTGGTGGTCACAAGGGGTGCAAAATTTTGCTAACTTCAAGGGATAAAAAAGTGTTATGTGTTGAAATGGATGTAAAGACAACTTTTTGTGTAAGGGAATTAGATGATAAAGATGCTTTGATTTTGTTTAAAAAGTTGGCCGGAATACATAATGAAATGTCTAGCTCTAAACAAGAAATTGTGAAGAAGTATTGTGAGGGCTTACCCATGGCAATAGTTGTAGTTGCAAGGGCATTAAGAAACAAGAGTGAGTCAGTGTGGGAAGCAACAATAAAAAAACTTAAAAAGCATGAATTGGTGGGAGAGGGGACATCTATGGATATTTCAGTGAAGATGAGTTATCACCATCTTGAAAATGAAGAGATAAAGTCCATTTTTTTACTCTGTGCACAAATGGGTCGTCGACCATTAATTATGGACTTAGTGAAGTATTGTTTTGGTTTGGGTATACTTGAAGGGGTCTCCTCGCTTTGGGAAGCACGAGAAAAAATTAAGACATCAATCCAAAAGCTAAAGGACTCTGGCTTGTTATTGGACGAAAGTTCTAATAATCATTTCAACATGCATGGCATGGTTCGAGACACTGCTTTGTCTATAGCACACAAGGATCACAATGCTTTTAATTTGAGAAATGGAAAACTAGATGACTGGCCCGAACTCGAAAAGTGCACTTCAATTTCTATATGCAATAGTGATATCATTGATGGGCTTCCTGAAGTCATAAATTGTCCTCAACTGAAACTTTTCCAAATTGACACTAATGATCCATCTTTGGAAATACCCGAGGGTTTTTTTAGAAGAATGAAAAATCTGAATGTTTTAATAATGACTGGTTTTCGTCTTTCGAGCTTACCATATTCAATTCAATGCCTATTAAAACTCAGAATGCTTTGTTTGGAACGATGTACTTTACGTTGCAACCTATCTATAATAGGAAAGCTGAAAAAATTAAGAATTCTCAGCTTCTCTGGATCTCTACTTCAAAATTTGCCGGCTGAGTTGCAATGCTTGGATAAGTTACGAATGCTAGACATCAGTGATTGTTCTGAATTGAAGATTATTCCACCTAATCTTATATCAAGTTTAACATGTTTGGAAGAGCTATATATAAGAGAAAGCTTGATCAAAATGTTGGTGGACAGAGAGACAAACAAAGGTCAAGATTTGTTTCTTTCCGAGCTAAAGAATTTACATCAGTTGAAAGTGGTGGAGTTAAGTATCCCATGTGTTTCAATTTTTCCCAATCACTTGTTCTTTGACAAGTTAAAAGATTACAAGATTATGATTGGAGACTTTGATTTTTTTTCTCTTGGAGAATTTAGGATGCCCGATAAGTATGAAACATTGAGAGTTTTGGCACTGCAACTGAAGGATGACACTAACATTCATTCCCAGGAAAGCATAAAATTGTTGTTAAAAACAGTACAAATTTTGTTGTTGGGAAAGATAAATGGTGTTCAAAGTGTTGTGAATGAGTTGAATATAGATGGATTTCCAGATCTGAAACACTTATCCATCATAAATAATAGTGACATCAAATATGTCAATTCAACAGAATTGTGTAATTATGTGAATGTTTTTCCCAATTTGGAATCTCTTTGTCTCAACAATCTGGGGAACTTAGACATGATATGTTACGGTCCAATTACAGTTGTGTCATTTGCCAAATTAAAAACCATCAAGGTTGAGATGTGTTACCGATTGAAGAATCTTTACTCCTTGGACATGGTTATGTTTCCTACTGGTGCACAAACATGTGAGATTTCTGAATATAATTCTTACATGGATAAATTTCTTTCCAGTCTAGAAATAATTGAAGTTTCTGAATGTGGATCTTTAAAGGAGATCCTTCAAATACCAAAGCATTATGGTAAGGTTGAGTTTCTTAAGTTGCACACTTTGACACTCCGACTATTACCATTATTTACATGTTTCTATACCAAAGTGGAGAAATTTTGCTGTCCGCATCTAACAGAGGCTCAAACTACAAATAGGGGCCTCACAGAACTTAGTGAAGAAGATGAACAAAGTGATAAGGAACCTCCTCTTTTTGGTGAACTGGTTGAAATTCCAAACTTAGAGACTTTGAATTTATCCTCACTCAACATCCATAAGATATGGGGCGACCAACACTCGTCAAGTTTCATCTTTCAAAACTTGATAAAATTAGTTGTGAAAGATTGTGATAAATTGACATATCTATGTTCATTGTCTATGGCTAGAAGTTTGAAGAAGCTGAAAAGCCTTGTCATAAGTGAGTGTCCAATCATGGAGAAGATTTTTAAGACCGAAAGAAATAGTGCAGACAAGGTCTGCATCTTTCCTATGTTAGAGGAAATCCACCTTAGCAAAATGAATAGACTAACCGATATGTGGCAAACTAAAGTGAGTGCAGATTCCTTTTCTAGTCTCATTTCTGTGAAAATTGAAGAGTGCAATAAATTAGACAAGATTTTTCCAAGTCACATGGAAGGATGGTTTGAAAGTTTGGACAACTTGAAAGTTTCTTGGTGCCAGTCGGTGGAAGTGATTTTTGAAATCAATGTTTCTCAAGAAAAAGATGAATTTGGAGGAATAGACACAAATTTGCAGGTAATTCTTCTTGAAGGCCTCCCAAATCTGAAACAATTGTGGAGTACAGATCCAAATGGAATTCTTAACTTTAAAAAATTGCAGAGCATAGAGGTAGGTAGTTGTGATGAACTTAGGAATTTGTTTCCAGTTTCTGTTGCCAAAGATATTCCAAAGCTTGAACACATGTCAGCATTACATTGTGAGAAAATGGAGGAAATTGTTGCAAGTCAAGATGCATCAGAAGCTAAGAAAGATCTATTGCTGTTTCCTAAACTAACCTCTGTGAGATTATATGATCTACCAAACATGAAGTATTTCTACAAGAAGAGATATCCTATAAAGTGTCCAAAGCTGAAGGAGTTGAGTGTGAGACGATGTGTGAGCTTAAAACATTTCTCAAAGATACCATTAAAACAACAAACAAAGAGCAAAATTTCGTTTTCTCAATTGAAGAGGTATTCCCCAACTTGGAGCACATGGAAATTGACTTCAAAGAAGCACAAGAATTGTTACCGAAGTACCAAATGCACCGCCTAA 4092 0.3575 MDFLGPFGKVVEGVIDFVSKNGVRHMTYIVHYNENVRELKDSVRDLKFEKQRIIHQCEEGTKNLNNIEEKVTEWVRKVSEIDTTIEVFENDDGHTKARSPNCFVFPYLWNRHRLGRQAYKEKVNVKRLIDESPKVDEVLYRQNVTSNDATLSNCGFVEFSSIKSTMEKVMIELQDSSVRMIGLYGRGGVGKSTLVKEIARKAKEKKLFDVVVKVEITADPNPQKIQEEIAYVLGLRLEGEGENVRADCLRRRLKKESGNILLILDDLWDKLDLNKLGIPLDDDEDDDDFNSGNKDLSRQKNKDNKDPNQKTQEKKDDNRTVLKKEKFLGGHKGCKILLTSRDKKVLCVEMDVKTTFCVRELDDKDALILFKKLAGIHNEMSSSKQEIVKKYCEGLPMAIVVVARALRNKSESVWEATIKKLKKHELVGEGTSMDISVKMSYHHLENEEIKSIFLLCAQMGRRPLIMDLVKYCFGLGILEGVSSLWEAREKIKTSIQKLKDSGLLLDESSNNHFNMHGMVRDTALSIAHKDHNAFNLRNGKLDDWPELEKCTSISICNSDIIDGLPEVINCPQLKLFQIDTNDPSLEIPEGFFRRMKNLNVLIMTGFRLSSLPYSIQCLLKLRMLCLERCTLRCNLSIIGKLKKLRILSFSGSLLQNLPAELQCLDKLRMLDISDCSELKIIPPNLISSLTCLEELYIRESLIKMLVDRETNKGQDLFLSELKNLHQLKVVELSIPCVSIFPNHLFFDKLKDYKIMIGDFDFFSLGEFRMPDKYETLRVLALQLKDDTNIHSQESIKLLLKTVQILLLGKINGVQSVVNELNIDGFPDLKHLSIINNSDIKYVNSTELCNYVNVFPNLESLCLNNLGNLDMICYGPITVVSFAKLKTIKVEMCYRLKNLYSLDMVMFPTGAQTCEISEYNSYMDKFLSSLEIIEVSECGSLKEILQIPKHYGKVEFLKLHTLTLRLLPLFTCFYTKVEKFCCPHLTEAQTTNRGLTELSEEDEQSDKEPPLFGELVEIPNLETLNLSSLNIHKIWGDQHSSSFIFQNLIKLVVKDCDKLTYLCSLSMARSLKKLKSLVISECPIMEKIFKTERNSADKVCIFPMLEEIHLSKMNRLTDMWQTKVSADSFSSLISVKIEECNKLDKIFPSHMEGWFESLDNLKVSWCQSVEVIFEINVSQEKDEFGGIDTNLQVILLEGLPNLKQLWSTDPNGILNFKKLQSIEVGSCDELRNLFPVSVAKDIPKLEHMSALHCEKMEEIVASQDASEAKKDLLLFPKLTSVRLYDLPNMKYFYKKRYPIKCPKLKELSVRRCVSLKHFSKIPLKQQTKSKISFSQLKRYSPTWSTWKLTSKKHKNCYRSTKCTA 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02040 1363 Gene3D Ribonuclease Inhibitor 1153 1337 IPR032675 -
Viun10g02040 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 456 IPR027417 -
Viun10g02040 1363 Coils Coil 29 49 - -
Viun10g02040 1363 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1156 1330 - -
Viun10g02040 1363 Gene3D Ribonuclease Inhibitor 878 1099 IPR032675 -
Viun10g02040 1363 MobiDBLite consensus disorder prediction 284 317 - -
Viun10g02040 1363 Gene3D - 138 354 IPR027417 -
Viun10g02040 1363 SUPERFAMILY L domain-like 1016 1356 - -
Viun10g02040 1363 PRINTS Disease resistance protein signature 662 678 - -
Viun10g02040 1363 PRINTS Disease resistance protein signature 254 268 - -
Viun10g02040 1363 PRINTS Disease resistance protein signature 392 406 - -
Viun10g02040 1363 PRINTS Disease resistance protein signature 180 195 - -
Viun10g02040 1363 Pfam NB-ARC domain 331 427 IPR002182 GO:0043531
Viun10g02040 1363 Pfam NB-ARC domain 164 284 IPR002182 GO:0043531
Viun10g02040 1363 MobiDBLite consensus disorder prediction 291 317 - -
Viun10g02040 1363 Gene3D Ribonuclease Inhibitor 546 873 IPR032675 -
Viun10g02040 1363 Gene3D - 360 445 IPR042197 -
Viun10g02040 1363 SMART AAA_5 177 365 IPR003593 GO:0016887
Viun10g02040 1363 SUPERFAMILY L domain-like 515 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02040 Viun-Chr10 35387250 35397020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02040 170 530 WRKY Transcription Factor Family AT5G45050 27.078 3.40e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02040 - - var:108346440 2129.75