Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01990 ATGCCAATACTGCACCGCTCACCATGGAAGCACCTGGAACAGTTGCAGCAGCGAAATGCTCTGTTGAAATCCTCTTCTCTGTTTCGATATTTCATGTTATTGGCCTTTGAAGCGGGAGGGCTCCTGAGGGCCATAGTGTTGGTTCTATTATACCCTTTTGTTTGTGTAGTAGGAAGCGAGATGGGGTTGAATATAATGGTGATGACATGCTTCTTCGGGATGAAAGCATCAAGCTTCAGAGTGGGACGCTCCGTGCTGCCAAAATTCTTGTTGGAAGACGTTGGTGCTGAAATGTTTTATGGCCTCGGTTATTCAAAAAACCGAGGCCTAAAGTGGCTCAATGGCCTCGGTCGAAGGGGACTCGAAGCCAAAGGCGGCGGCGCTGATGAAAATTTTAAATTAGGGAAGAATCAGGTTAAGAAGGTTTGTGATGTCGCTGCTGAGAACCTCTCCTCAGACATTTGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGATATTACAGATGTAGCAGCTCAAAAGGATGTTTAGCGAGGAAACAAGTGGAGAGGAACAGATCGGACCCAACAATGTTCATAGTGAGATACACCGGTGAACACAACCACCCTGCTCCGACTCATAAAAGCTCCCTTGCTGGCTCCACGCGCTACAAACCTCAGACCGGTGGAGACACAGCCGCCACAAAAGCGATTTCTCCGGCGACCTCATCAGACGTGGCACAGCACAGTACGAAGTCAGAGTGCACAGAAGAGGAGTTGGAAGATCTGATGAAGGATGATGAAGAAGCAAATGAATTAGAGTTAACCGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCACTGATCCCTTTACAGCTAGTAGCAGCATTGATCGGTGGCCACTGTCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA 963 0.4808 MPILHRSPWKHLEQLQQRNALLKSSSLFRYFMLLAFEAGGLLRAIVLVLLYPFVCVVGSEMGLNIMVMTCFFGMKASSFRVGRSVLPKFLLEDVGAEMFYGLGYSKNRGLKWLNGLGRRGLEAKGGGADENFKLGKNQVKKVCDVAAENLSSDIWAWRKYGQKPIKGSPYPRYYRCSSSKGCLARKQVERNRSDPTMFIVRYTGEHNHPAPTHKSSLAGSTRYKPQTGGDTAATKAISPATSSDVAQHSTKSECTEEELEDLMKDDEEANELELTETVVSDDFFEGLEELTGSATDPFTASSSIDRWPLSNNATTAAGGS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01990 320 SUPERFAMILY WRKY DNA-binding domain 148 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g01990 320 MobiDBLite consensus disorder prediction 291 320 - -
Viun10g01990 320 Coils Coil 245 272 - -
Viun10g01990 320 MobiDBLite consensus disorder prediction 294 320 - -
Viun10g01990 320 FunFam WRKY transcription factor 22 135 204 - -
Viun10g01990 320 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g01990 320 MobiDBLite consensus disorder prediction 209 249 - -
Viun10g01990 320 Gene3D WRKY domain 135 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g01990 320 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 136 293 IPR044810 GO:0003700
Viun10g01990 320 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g01990 320 MobiDBLite consensus disorder prediction 205 253 - -
Viun10g01990 320 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01990 Viun-Chr10 34709914 34713544 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01990 133 319 WRKY Transcription Factor Family AT4G01250 57.868 1.99e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun10g01990 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01990 K13425 - gmx:100815829 287.73