Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01986 ATGGATTGGTCGGGGCCCTTTGGCAAAGTTGTAGAAGGAGTGATTAGTTTTGTATGGAGACACAGTGTGCGACACGTGACTTACATTGTCCGTTATAAGCAAAGTGTTCTTGAACTGAAGGATAGCGTTAAGGATCTTGGATATGAAAAAGATAAGATAGATCATCAATGTGATGAGGAGGCTGTCAGAAATCTAAATAACATTGAAGGTAAGGTTACCGAATGGAATCGAAAAGTGAGTGAAATTGAGACTAAGGTGGAGAAGTTTGAGAACGATGATGGCCATAAAAGAGCCCGATCGATCAATTGTTATGTTATTCCATACTTCTGGAATAGACACAGATTAGGAAGACAAGCAACGAAGATGGAAGTGGATGTTAAAAATCTAATTGATAAGTCCCCTAAGTTTGATGAAATTTCCTATAGGCAAAACCTAACATCTAATGAGGCCACATTGTCTAATTTTGACTTTATAGAATTTGATTCAACAAAATCCACAATGGAAAAAGTAATGAGACAACTTGAAGATTCCAACGTGAGAATGGTCGGATTGTATGGGCGAGGTGGTGTGGGTAAAAGTGCTTTAATCAAAGAAATTGCAAGGATAGCTAGAGACAAGAAGTTGTTTAATGTGGTGATTAAAGTAGAAATCACAATCAATCCCGATCTACAAAAAATCCAGGAAGAAATTGCTTACGTGTTAGGATTGAGATTGGAAGGTGAAGGTGAAAATGTGAGAGCTGATTGTCTACGAAGAAGGTTAAAGAAAGAAAAAGGGAACACCCTTTTAATCTTGGATGACCTTTGGCATAAATTAGATTTGAACAAGTTAGGGATTCCCATTGATGATAATGATGACAATGATGATTTCAGTAGTGATAACAAGGATCCTAATCACAAAGGGTTGAAAAGAGAAAAAATCATTGGTGGTCACAAGGGGTGCAAAATTTTGCTAACTTCACGTGAAAAAAGAGTATTGGATGTCGAAATGGACGTAAAACCAACTTTTTGTGTAGAGCAATTAGATGACAAGGATGCTTTGAAGCTTTTTCAGAAGTTGGCTGGAATACATAATGTAATGCCAGACTCTAGACAAGAAATTGTGAAGTATTGTGCAGGGTTACCGATGGCAATAGTTACAGTTGCAAAGGCATTAAGAGGTAAGAGCGAGTTAGTATGGGAAGCAGCACTTGGAAAACTTAAAAAGCAGGAATTGGTGGGAGTGCAGACATATATGGACATTTCAGTGAAGATGAGTTATGACCATCTAGAAAATGAAGAGATCAAATCCATTTTCTTACTTTGTGCTCAACTGGGCCATCAACCATTAATTATGGACTTAGTGAAGTGTTGTTTTGGTTTGGGTATACTTGAAGGCGTCTCCTCACTTTGGGAAGCTCGAGACAAAATTAAGATAACAATCCAAAAGCTAAAAGACTCGGGCTTACTATTGGATGGAAATTCTGATATTCATTTCAATATGCATGACATAGTTCGAGATGCTGCTTTGTCTATAGCAAACAAGGAGAAGAATGTTTTTACTCTAAGAAATGGAAAACTAGATGACTGGCCTGAACTCAGCAGATGCACTTCTATTTCTTTATGCAATTGTGATATCATTGACGAGCTTCCTCTAGTCAATTGTTCAAAACTTATTTTTTTTCAAATAGACACTAATAATCCATCTTTGACAATCCCTGAGAAGTTTTTTGTAGGAATGAAAAATCTCAAAGTTTTAATATTGACTGGTTTTCATCTACAAAGATTACCACCTTCGATCAAATACCTATTAAAGCTCAGGATGCTTTGTTTGGAGCGGTGCACCTTAGAGGACACTTTACCAATAGGAGAGCTAAAAAAGTTAAGAATTCTTAGCTTCTTTGGATCCCAACTTAAAAATTTGCCAACTGAGTTGGGGTGCTTGGATAAGTTACAACTCCTAGACATCAACGATTGTTCCATACTGGAGACTAATATTCCACCTAATATTCTATCAGGTTTGAAAAATTTAGAAGAGTTGTACATTAGAAAGAGCTTGATCAAAATGTTGGTGGAAGGAGAGCCAAACCATGGTCAAAATTCGTTTCTTTCTGAGCTAAAGAATTTGCATCAGTTAAAAGTTTTGGACTTAAGCATCCCATGTTTTTCAGTTTTTCCCAATCACTTGTTCTTTGACAAGTTAAAAAACTACAAAATTGTGGTTGGAGACTTGGAAATGTTTTCTGTTATAGGCTTTAAGATGATTGATAAGTACGAAACGTACAGAGTTTTGGCATTGCAACTGAGTCATGACACTAGCTTTCACTCCCAAGAAGACATAAAATTGTTGTTTAAAACAGTACAAAGTTTGTTATTGGGAAAGGTAGATGATGTTGTTAAAGTTGTTAATGAGTTGAATATAGATGGGTTTCCAGATCTGAAACACTTATCCATCACAGATAGCAAAGCCATCAAATATGTCAATTCAATGGAATTGTCCAATTGTGTAAATGTTTTTACCAATTTGGAATCTCTATGCCTTTACAATCTGAAGAACTTGGAGATGATATCTTATGGTCCACTTACAGTTGCTTCATTCTCCAAATTAAAGTCCATCAAGGTGAATATGTGTGATCAATTGGTGACTCTCTACTCCGTTTACATGGTGGAATTTGCTAATAGTGAAGAATCATGTGAGATTTGTAAATATAATTCTTACTTGGATAAATTTTGTGCTAGTCTAGAAACAATCGAGGTTTCTGAATGTGAAACTTTAAAGGGAATCATTCAAATACCAATGAATTATGATAACGTTAAGTTTCTAAAGTTGCAGACTTTGTCATTCCAATCGTTACCATCATTTACATGTTTTTATACCGAAGTGGAGGAGTCTTGCTGGCCACATCCGACAAAGCCTCAATCTGAAAATAGTAGTAGTGAAGAAGATCAGAAAAGTGATAAGGCACCTCCTCTTTTTGGTGAACTGGTATGA 2970 0.362 MDWSGPFGKVVEGVISFVWRHSVRHVTYIVRYKQSVLELKDSVKDLGYEKDKIDHQCDEEAVRNLNNIEGKVTEWNRKVSEIETKVEKFENDDGHKRARSINCYVIPYFWNRHRLGRQATKMEVDVKNLIDKSPKFDEISYRQNLTSNEATLSNFDFIEFDSTKSTMEKVMRQLEDSNVRMVGLYGRGGVGKSALIKEIARIARDKKLFNVVIKVEITINPDLQKIQEEIAYVLGLRLEGEGENVRADCLRRRLKKEKGNTLLILDDLWHKLDLNKLGIPIDDNDDNDDFSSDNKDPNHKGLKREKIIGGHKGCKILLTSREKRVLDVEMDVKPTFCVEQLDDKDALKLFQKLAGIHNVMPDSRQEIVKYCAGLPMAIVTVAKALRGKSELVWEAALGKLKKQELVGVQTYMDISVKMSYDHLENEEIKSIFLLCAQLGHQPLIMDLVKCCFGLGILEGVSSLWEARDKIKITIQKLKDSGLLLDGNSDIHFNMHDIVRDAALSIANKEKNVFTLRNGKLDDWPELSRCTSISLCNCDIIDELPLVNCSKLIFFQIDTNNPSLTIPEKFFVGMKNLKVLILTGFHLQRLPPSIKYLLKLRMLCLERCTLEDTLPIGELKKLRILSFFGSQLKNLPTELGCLDKLQLLDINDCSILETNIPPNILSGLKNLEELYIRKSLIKMLVEGEPNHGQNSFLSELKNLHQLKVLDLSIPCFSVFPNHLFFDKLKNYKIVVGDLEMFSVIGFKMIDKYETYRVLALQLSHDTSFHSQEDIKLLFKTVQSLLLGKVDDVVKVVNELNIDGFPDLKHLSITDSKAIKYVNSMELSNCVNVFTNLESLCLYNLKNLEMISYGPLTVASFSKLKSIKVNMCDQLVTLYSVYMVEFANSEESCEICKYNSYLDKFCASLETIEVSECETLKGIIQIPMNYDNVKFLKLQTLSFQSLPSFTCFYTEVEESCWPHPTKPQSENSSSEEDQKSDKAPPLFGELV 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01986 989 Gene3D - 140 333 IPR027417 -
Viun10g01986 989 Gene3D Ribonuclease Inhibitor 524 957 IPR032675 -
Viun10g01986 989 SUPERFAMILY L domain-like 494 946 - -
Viun10g01986 989 SMART AAA_5 178 345 IPR003593 GO:0016887
Viun10g01986 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 435 IPR027417 -
Viun10g01986 989 PRINTS Disease resistance protein signature 255 269 - -
Viun10g01986 989 PRINTS Disease resistance protein signature 181 196 - -
Viun10g01986 989 PRINTS Disease resistance protein signature 639 655 - -
Viun10g01986 989 PRINTS Disease resistance protein signature 371 385 - -
Viun10g01986 989 Gene3D - 340 424 IPR042197 -
Viun10g01986 989 MobiDBLite consensus disorder prediction 960 989 - -
Viun10g01986 989 Coils Coil 65 92 - -
Viun10g01986 989 Pfam NB-ARC domain 165 285 IPR002182 GO:0043531
Viun10g01986 989 Pfam NB-ARC domain 311 418 IPR002182 GO:0043531
Viun10g01986 989 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01986 Viun-Chr10 34560727 34563731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01986 178 509 WRKY Transcription Factor Family AT5G45050 25.429 1.07e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01986 - - vum:124840127 1598.18